DRSC/TRiP Functional Genomics Resources

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Protein Alignment Sec71 and cyth3a

DIOPT Version :9

Sequence 1:NP_609675.2 Gene:Sec71 / 34785 FlyBaseID:FBgn0028538 Length:1653 Species:Drosophila melanogaster
Sequence 2:XP_001342037.2 Gene:cyth3a / 100002190 ZFINID:ZDB-GENE-120612-1 Length:396 Species:Danio rerio


Alignment Length:193 Identity:95/193 - (49%)
Similarity:134/193 - (69%) Gaps:3/193 - (1%)


- Green bases have known domain annotations that are detailed below.


  Fly   582 RKEVMETGIELFNRKPQKGVQFLQEKQLLGATCGDIARWLHEDERLDKTVIGNYIGENDDHSKEV 646
            |.:.:..|.:.||..|:||:|||.|..||..|..|||::|::.|.|:|||||:|:||.||.:..|
Zfish    63 RSKQIAVGRKKFNMDPKKGIQFLLENDLLQHTPEDIAQFLYKGEGLNKTVIGDYLGERDDFNIRV 127

  Fly   647 MCAYIDAFDFRQMEVVAALRFLLEGFRLPGEAQKIDRLMEKFASRYCECNPKNQLFQSADTVYVL 711
            :.|:::..:|..:.:|.|||..|..||||||||||||:||.:|:|||:|||  .:|||.||.|||
Zfish   128 LQAFVELHEFADLNLVQALRQFLWSFRLPGEAQKIDRMMEAYAARYCQCNP--GVFQSTDTCYVL 190

  Fly   712 AFSIIMLTTDLHSPQVKHKMTKEQYIKMNRGISDSKSDLPEEYLSSIYDEISEHEIKMKNNSG 774
            :||:|||.|.||:|.|:.|.:.|::|.|||||::. .|||||.|.::|:.|.....|:..:.|
Zfish   191 SFSVIMLNTSLHNPNVRDKPSVERFISMNRGINEG-GDLPEELLRNLYESIKNEPFKIPEDDG 252

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Sec71NP_609675.2 PLN03076 13..1580 CDD:215560 95/193 (49%)
DCB 30..212 CDD:292830
Sec7_N 312..465 CDD:289549
Sec7 582..767 CDD:279680 93/184 (51%)
DUF1981 1080..1161 CDD:286414
cyth3aXP_001342037.2 Sec7 63..245 CDD:279680 93/184 (51%)
PH_GRP1-like 260..379 CDD:269954
PH 264..377 CDD:278594
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C170582798
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG5307
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
32.740

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