DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG16863 and zbed1

DIOPT Version :9

Sequence 1:NP_001036361.1 Gene:CG16863 / 34784 FlyBaseID:FBgn0028931 Length:661 Species:Drosophila melanogaster
Sequence 2:XP_004911791.1 Gene:zbed1 / 733978 XenbaseID:XB-GENE-6084277 Length:693 Species:Xenopus tropicalis


Alignment Length:778 Identity:142/778 - (18%)
Similarity:260/778 - (33%) Gaps:278/778 - (35%)


- Green bases have known domain annotations that are detailed below.


  Fly     2 SRSRIWKFYDKLDRNS---------AQCQLCEKVIKTSGNTSNLMKHM-KTHPQINLFDDDVVVE 56
            ::|::||::. .|.|:         ..|::|...|..|||||||..|: |.||            
 Frog    21 AKSKVWKYFG-FDTNAEGCILQWKKIYCRICMAQIAYSGNTSNLSYHLEKNHP------------ 72

  Fly    57 RGIYKRREQDDKLRFRKVVPFKEESSDFHSELLFKAAKDASGIIELDDQGMIKAAAEDRISTKSV 121
                                  :|..:|                       :|:..|......:.
 Frog    73 ----------------------DEYCEF-----------------------VKSNTEQMREAFAT 92

  Fly   122 GYAWVSPEATVSRT-ETVGGDDIIEFEPKEELDESEKSPLPQIHAVPFAGHDNLKMEEPLPSESP 185
            .::.:.||::.... ||:...:...||.|:.|:                                
 Frog    93 AFSKLKPESSQQVVQETLIMKNTQSFENKKHLE-------------------------------- 125

  Fly   186 FHKDIAFFVCRDRQSLQIVQGEGFQHLVKVLCPTYRPPSAAKLEAIIC-----RESEAQRSKLCQ 245
            ....:...:|.......|:....|::|:|...|.|..|    :...||     .:..|.|..:.:
 Frog   126 LTSSVISLICEGMYPASILDEPTFKNLLKTAEPRYEVP----MRKYICSRVLPEKYNAIREMVLK 186

  Fly   246 QLADISTLSLSCSVHTN-----AESRSWMELVAHF-HEGRQRI----SRTLSVLRLPD------- 293
            .|.||    |.|.:.|:     .::||::.|..:| ..|....    ||.|....:|:       
 Frog   187 DLTDI----LWCGISTDMWKSVTQNRSYVTLSVYFMSTGPSNCLSVNSRCLKTFEVPEENKAETI 247

  Fly   294 ---LFT------------------SNDLVDRMDQVCQRFDIPKSRICCVSTRSSQLLEDAVTSFM 337
               |:.                  |.|:|    :.|...|||..                     
 Frog   248 TRVLYETFIEWGISAKVFGATTDFSKDIV----KACSLLDIPVD--------------------- 287

  Fly   338 GAHHHVPCFADQLNSILEEVVQRPEIRHLRDKVRSHVQSTLQLNPQLDSIHRPISVYNMLDLYLK 402
                 :||.....:..:::..|.|::..|..:.|..|:...|.:         |::|.:.:...:
 Frog   288 -----MPCLGQTFDMGIQQAFQLPKLSSLLSRCRKLVEYFQQSS---------IAMYMLCEKQKQ 338

  Fly   403 Q-----------------TLV---------------------QEPLPLSTSEVDLCQQLLDVLRP 429
            |                 |||                     ...|.|..||.:..:.|:|:|:|
 Frog   339 QNLFPCMLISDRVSWWGSTLVMLQRLKEQQFTIAGVLVEDSNNHHLMLEASEWNTIEGLVDLLQP 403

  Fly   430 LTSSMRELSRTPYPAASTALPIAQTLIN---ELKQEKSAEHMVAREIRLFLVQQLEEIFERM-ER 490
            .......||.:.||..|...|:...|:|   .:|:....|..:|:|:   :.:.|...:::. |.
 Frog   404 FKQVAEMLSVSKYPTISMVKPLLHMLLNTSLNIKETDPKEISMAKEV---IAKVLSSTYQQTPEI 465

  Fly   491 NLHLALASLLDPRFRNIPFRSGALVAQYMTQLYDMMQAHVDSGEQAVAKHPENRDHYDIWAAFKS 555
            ::.|.:|:.||||::.:||.|....||...::.:..:..:|.|::.: |:.|           |.
 Frog   466 DMFLNVATFLDPRYKKLPFLSAFERAQVENRVIEEAKCFIDKGKENI-KNEE-----------KV 518

  Fly   556 FSHGKQ----RIVNGSNGPEA--DDEIARYFCAGMST------------------------LRAD 590
            |...::    ::.:.:..|.:  :..:|..||...|:                        |..|
 Frog   519 FIISEEPPMKKMASSTPPPTSSINSMLAEIFCQSGSSEDQEEWHAQVVEELSNFKSQKVLGLNED 583

  Fly   591 PFQLWEELAEAHPFLHNVAQRYLHVPATAEPADRLFTAEGAAVAAQYARLIENNMENILFMAE 653
            |.:.|.:.....|.|..|.|:|..:..|....:|||.:....|.::..||...:::..:|:.|
 Frog   584 PLKWWSDRLTLFPLLPKVLQKYWCIRPTRVFPERLFNSSANVVNSKRNRLAPAHVDEQIFLYE 646

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG16863NP_001036361.1 zf-BED 4..44 CDD:280965 17/49 (35%)
zbed1XP_004911791.1 zf-BED 23..72 CDD:397159 17/49 (35%)
DUF4413 412..514 CDD:405121 26/105 (25%)
Dimer_Tnp_hAT 568..647 CDD:399013 18/79 (23%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 1 1.000 59 1.000 Domainoid score I10461
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 118 1.000 Inparanoid score I4637
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D223749at2759
OrthoFinder 1 1.000 - - FOG0012423
OrthoInspector 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
44.060

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