DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG16863 and DAYSLEEPER

DIOPT Version :9

Sequence 1:NP_001036361.1 Gene:CG16863 / 34784 FlyBaseID:FBgn0028931 Length:661 Species:Drosophila melanogaster
Sequence 2:NP_189803.1 Gene:DAYSLEEPER / 3769417 AraportID:AT3G42170 Length:696 Species:Arabidopsis thaliana


Alignment Length:610 Identity:113/610 - (18%)
Similarity:218/610 - (35%) Gaps:165/610 - (27%)


- Green bases have known domain annotations that are detailed below.


  Fly   146 FEPKEELDESEKSPLPQIHAVPFAGHDNLKMEEPLPSESPFHKDIAFFVCRDRQSLQIVQGEGFQ 210
            :.||  .|...:....|.:|.|:...:..|..:          :||..:......|.:||..||.
plant   137 YTPK--TDTPRRRYRSQNNASPYVAFNQDKCRQ----------EIAKMIIMHDYPLHMVQHPGFV 189

  Fly   211 HLVKVLCPTYRPPSAAKLEAIICRESEAQRSKLCQQLADI-STLSLSCSVHTNAESRSWMELVAH 274
            ..|:.:.|.:...|...::........|::..:.:.|..| ....|:....|:..:..::.:.||
plant   190 SFVQSIQPHFDAVSFNNVQGDCVATYLAEKQNVMKSLEGIPGRFCLTLDFWTSKLTLGYVFITAH 254

  Fly   275 FHEGRQRI-SRTLSVL--RLPD---------------------LF-------TSNDLVDRMDQVC 308
            :.:...:| .:.|:||  ..|:                     ||       .||..|:.:    
plant   255 YIDSDWKIQKKLLNVLMESYPEADEALSLAVANCVSEWGLEGKLFNVTFNHPASNSAVENI---- 315

  Fly   309 QRFDIPKSRICCVSTRSSQLLEDAVTSFMGAHHHVPCFADQLNSILEEVVQRPE--IRHLRDKVR 371
                  :.::|   .::..:|:..:.  :|     .|.|....|:.::|:::.:  |:::||.|:
plant   316 ------RPQLC---IKNPGILDGQLV--IG-----NCVARTFGSLAKDVLEKGKDVIKNIRDSVK 364

  Fly   372 ------SHVQSTLQLNPQLDSIHRPI-----------------------SVYNMLDL----YLKQ 403
                  ||.:...:|..||......:                       .|::.||.    |.| 
plant   365 HVKTSESHEERFTELKEQLQVPSEKVLSLDDQTQWNTTYMMLVAASELKEVFSCLDTADPDYKK- 428

  Fly   404 TLVQEPLPLSTSEVDLCQQLLDVLRPLTSSMRELSRTPYPAASTALPIAQTLINEL-KQEKSAEH 467
                   |.|..:....:.|...|:||..::..|.       ||..|.|.|..:|: |.:.....
plant   429 -------PPSAEDWRHVEALCTFLKPLFEAVSTLQ-------STGNPSAVTFFHEVWKTQSDLSR 479

  Fly   468 MVAREIRLF--LVQQLEEIFERMER--NLHLALASLLDPRFRNIPFRSGALVAQYMTQLYDMMQA 528
            .:|.|....  :.:.::|..::..|  :|.||:|.::||||:.      .||....::::     
plant   480 AIAGEDPFVTGIAKTMQEKVDKYWRDCSLVLAMAVVMDPRFKM------KLVEFSFSKIF----- 533

  Fly   529 HVDSGEQAVAKHPENRDH--YDIWAAFKSFSHGKQRIVNG---------------SNGPEADDEI 576
                ||.| .|:.:..|.  ::::..:.:....:.....|               :.|.....|:
plant   534 ----GEDA-GKNIKTVDDGIHELFTEYMALPSPQNTTSEGGKADGLSDFDTYIMETTGQNLKSEL 593

  Fly   577 ARYFCAGMSTL--RADPFQL---WEELAEAHPFLHNVAQRYLHVPATAEPADRLFTAEGAAVAAQ 636
            .:|.   ..||  |...|.:   |::....:|.|..:|:..|.:|.:|...|.:|..|...:...
plant   594 DQYL---DETLLPRVQEFDVLDWWKQNKLKYPTLSKMARDILSIPVSAAAFDYVFDMEPREMDEY 655

  Fly   637 YARLIENNMENILFMAEIPTKEWQL 661
            ...|....:|     |.|..:||.|
plant   656 KTSLRPETVE-----ALICAREWLL 675

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG16863NP_001036361.1 zf-BED 4..44 CDD:280965
DAYSLEEPERNP_189803.1 ZnF_BED 70..121 CDD:214746
DUF4413 457..555 CDD:405121 26/113 (23%)
Dimer_Tnp_hAT 592..674 CDD:399013 21/89 (24%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG1121
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D223749at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 1 0.960 - -
43.780

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