DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG16863 and Zfp618

DIOPT Version :9

Sequence 1:NP_001036361.1 Gene:CG16863 / 34784 FlyBaseID:FBgn0028931 Length:661 Species:Drosophila melanogaster
Sequence 2:XP_008762033.1 Gene:Zfp618 / 313253 RGDID:1310743 Length:976 Species:Rattus norvegicus


Alignment Length:545 Identity:115/545 - (21%)
Similarity:193/545 - (35%) Gaps:159/545 - (29%)


- Green bases have known domain annotations that are detailed below.


  Fly   194 VCRDRQSLQIVQGEGFQHLVKVLCPTYRPPSAAKLEAIICRESEAQRSKLCQQLADISTLSL--- 255
            :|.|..:|.:|.|:.|..|.:.|.     .|.|:..|.          .:.:.|.:.:||:|   
  Rat   499 MCADLGALSVVSGKEFLKLAQTLV-----DSGARYGAF----------SVTEILGNFNTLALKHL 548

  Fly   256 -----------SCSVHTNA--------ESR-----SWMELVAHFHEGRQRISRTLSVLRLPDLFT 296
                       :|::.:||        .|:     |...|.|:..||....|..|.| :..|:..
  Rat   549 PRMYNQVKVKVTCALGSNACLGIGVTCHSQSVGPDSCYILTAYQAEGNHIKSYVLGV-KGADIRD 612

  Fly   297 SNDLVDR-MDQVCQRFDIPKSRI-----CCVSTRSSQLLEDAVTSFMGAHHHVPCFADQLNSILE 355
            |.|||.. :..|...|.:.:.|.     |.|||          ::|..|...:.|.|..|||:::
  Rat   613 SGDLVHHWVQNVLSEFVMSEIRTVYVTDCRVST----------SAFSKAGMCLRCSACALNSVVQ 667

  Fly   356 EVVQRPEIRHLRDKVRSHVQSTLQLNPQLDSIHRPISVYNML-DLYLKQTLVQE---------PL 410
            .|:.:               .|||..    |:|..|.:.|:. ||.....|.:|         |.
  Rat   668 SVLSK---------------RTLQAR----SMHEVIELLNVCEDLAGSTGLAKETFGSLEETSPP 713

  Fly   411 PLSTSEVD-----------LCQ--------------------QLLDVLRPLTSSMRELSRTPYPA 444
            |...|..|           :|:                    .|..:|.|:..::.|||....|.
  Rat   714 PCWNSVTDSLLLVHERYEQICEFYSRAKKMNLIQSLNKHLLSNLAAILTPVKQAVIELSNESQPT 778

  Fly   445 ASTALPIAQTLINELKQEKSAEHMVAREIRLFLVQQLEEIFERMERNLHLA--LASLLDP--RFR 505
            ....|||...|......:.:....|::...||| :.|:|.|:     :|.|  :|.:|||  :.|
  Rat   779 LQLVLPIYVRLEKLFTAKANDAGTVSKLCHLFL-EALKENFK-----VHPAHKVAMILDPQQKLR 837

  Fly   506 NI-PFRSGALVAQYMTQLYDMMQAHVDSGEQAVAKHPENRDHYDIWAAFKSF--SHGKQRIVNGS 567
            .: |::...::::....:.::.::                     ||....|  |..|.|...|.
  Rat   838 PVPPYQHEEIISKVCELINEVKES---------------------WAEEADFEPSAKKARSATGE 881

  Fly   568 NGPEADD------EIARYFCAGMSTLRADPFQLWEELAEAHPFLHNVAQRYLHVPATAEPADRLF 626
            :....:|      |:..|....:.....|.||.|..:.:.|..|..:|...|.|||....:..:.
  Rat   882 HPTAQEDDRLGKNEVYDYLQEPLFQATPDLFQYWSCVTQKHTKLAKLAFWLLAVPAVGARSGCVN 946

  Fly   627 TAEGAAVAAQYARLIENNMENILFM 651
            ..|.|.:..:...|...:|..::|:
  Rat   947 MCEQALLIKRRRLLSPEDMNKLMFL 971

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG16863NP_001036361.1 zf-BED 4..44 CDD:280965
Zfp618XP_008762033.1 C2H2 Zn finger 148..168 CDD:275368
C2H2 Zn finger 189..209 CDD:275368
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG1121
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.900

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