DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG16863 and znf618

DIOPT Version :9

Sequence 1:NP_001036361.1 Gene:CG16863 / 34784 FlyBaseID:FBgn0028931 Length:661 Species:Drosophila melanogaster
Sequence 2:NP_001313621.1 Gene:znf618 / 100330008 ZFINID:ZDB-GENE-030131-2063 Length:827 Species:Danio rerio


Alignment Length:749 Identity:142/749 - (18%)
Similarity:257/749 - (34%) Gaps:159/749 - (21%)


- Green bases have known domain annotations that are detailed below.


  Fly    16 NSA---QCQLCEKVIKTSGNTSNLMKHMKTHPQINLFDDDVVVERGIYKRREQDDKL-------- 69
            |||   .|.:|.|..|   ..|...:|...|...:.:|..:.|| .:.:..|...|:        
Zfish   120 NSAFRYTCDVCGKKYK---YYSCFQEHRDLHAVDDPYDHVIPVE-DLKEEAESFQKMGPKTGSYT 180

  Fly    70 ------RFRKVVPFKEESSDFHSELLFKAAKDASGIIELDDQGMI--KAAAEDRISTKSVGYAWV 126
                  :::...|::|..: .|:.|        .|...|..:|.:  ::....|:...:...:..
Zfish   181 CEYCGKQYKYFNPYQEHVA-LHAPL--------KGTFGLKLEGKLSGQSGQSSRVDINNSHNSSD 236

  Fly   127 SPEA-------TVSRTETVGG--------DDIIEFEPKEELDE----SEKSPLPQIHAVPFAGHD 172
            :|.:       :..:|.|.|.        ::::|.......|.    .|.||.|  ...| ||..
Zfish   237 TPNSRTYTSLPSPQKTYTCGACGIQFQFYNNLLEHMQSHAADNENHVKEDSPKP--CPAP-AGTQ 298

  Fly   173 NLKMEEPLPSESPFH------------------KDIAFFVCRDRQSLQIVQGEGFQHLVKVLCPT 219
            ....:.|.|::...|                  :.:...:|.|...|.::..:.|..|.:.|..|
Zfish   299 EQLWKSPQPAQQRNHMPSFQNRLLPEKERQQVAERLLRVMCVDLGLLGVLSSKDFLKLAQTLVDT 363

  Fly   220 YRPPSAAKLEAIICRESEAQRSKLCQQ----------------LADISTLSLSCSVHTNAESRSW 268
                 .::..|...||:....|.|..:                |...|:|.::.:.|:.......
Zfish   364 -----GSRNGAYSIREALGDMSSLALKQLPRMYNQVKVKVTCALGSNSSLGIAVTCHSQTVGPDS 423

  Fly   269 MELVAHFHEGRQRISRTLSVLRLPDLFTSNDLVDR-MDQVCQRFDIPKSRICCVS-TRSSQLLED 331
            ..|:..:.....|:.|.:..|:...|..|.:.:.. :..|...|.:.:.|...|: .|.|.|...
Zfish   424 CYLLTAYQVEGVRLRRYVLGLKEASLRESPEQIHHWVQNVLSEFVMSEIRTVYVTEPRLSSLTFC 488

  Fly   332 AVTSFMGAHHHVPCFADQLNSILEEVVQR--------PEIRHLRDKVRSHVQSTLQLNPQLDSIH 388
            ..|...     :.|....|.:.::.|:.|        .|:..|....|. :.:|...|.:..:..
Zfish   489 GRTGIC-----LRCAGCSLTATVQAVLGRRSLQARGLHELGELLATCRD-IAATTSFNHEGKTAE 547

  Fly   389 RPIS-------VYNMLDLYLKQTLVQEPLPLSTSEVDLCQ--------QLLDVLRPLTSSMRELS 438
            .|.:       ...:|.::.......|....|.|.|.|.|        .|..:|.||..:..|||
Zfish   548 DPAAPPCWDAVAEALLKVHENFEATCEAYGRSKSTVPLLQGLNKHLLGTLACLLAPLRQAALELS 612

  Fly   439 RTPYPAASTALPIAQTLINELKQEKSAEHMVAREIRLFLVQQLEEIFERMERNLHLALASLLDPR 503
            ....|.....||:...| .:|...|:.|.....::..:.::.|:|.| ::|| :| .:|.:|||:
Zfish   613 LERCPTLQNVLPVYLRL-EKLFTSKAGEAGAGSKLCHYFLEALKENF-KVER-VH-QVAMILDPQ 673

  Fly   504 FRNIPFRSGALVAQY-----MTQLYDMMQAHVD--SGEQAVAKHPE---------NRDHYDIWAA 552
            .:..|      |..|     ::::.||..:..|  ||..|.|...|         .|...|.   
Zfish   674 LKLRP------VPAYQHEEIISRVCDMAASMRDLGSGGSAGASVDERDGEGPSAPKRGRLDC--- 729

  Fly   553 FKSFSHGKQRIVNGSNGPEADDEIARYFCAGMSTLRADPFQLWEELAEAHPFLHNVAQRYLHVPA 617
                  |..|....:..|:...|:.:|....:.:...|..|.|..:.:.:|.|..:|...|.|||
Zfish   730 ------GLDRPSCDAEEPQVRKELFQYLGEPLFSGTGDLLQYWSSVMDRYPRLSRLALWLLAVPA 788

  Fly   618 TAEPADRLFTAEGAAVAAQYARLIENNMENILFM 651
            .|...:.:...|......:..::....|..::|:
Zfish   789 VAVHGECMSICEQTLAMKRKQQVTAEEMNKLVFL 822

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG16863NP_001036361.1 zf-BED 4..44 CDD:280965 9/30 (30%)
znf618NP_001313621.1 C2H2 Zn finger 83..103 CDD:275368
C2H2 Zn finger 127..147 CDD:275368 6/22 (27%)
Dimer_Tnp_hAT 746..>788 CDD:283379 10/41 (24%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG1121
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
10.900

Return to query results.
Submit another query.