DRSC/TRiP Functional Genomics Resources

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Protein Alignment Eato and Abcg1

DIOPT Version :9

Sequence 1:NP_001036360.1 Gene:Eato / 34783 FlyBaseID:FBgn0028539 Length:1597 Species:Drosophila melanogaster
Sequence 2:NP_445954.2 Gene:Abcg1 / 85264 RGDID:620294 Length:666 Species:Rattus norvegicus


Alignment Length:658 Identity:130/658 - (19%)
Similarity:237/658 - (36%) Gaps:204/658 - (31%)


- Green bases have known domain annotations that are detailed below.


  Fly   488 NNKEITVLLGHNGAGKTTMMNMIMGLVPKDSGK----IIVCSERDVASYRHLIGFCPQHSVFMSY 548
            |:.|:..::|.:||||:|:||::.|.  :::|.    :|....||:..:|.:..:..|..:.:.:
  Rat   109 NSGELVAIMGPSGAGKSTLMNILAGY--RETGMKGAVLINGMPRDLRCFRKVSCYIMQDDMLLPH 171

  Fly   549 MTCHQHLEFFAQLRGACRSDA-RDWADEKLKKLGLSDKRNEFGKNLSGGMKRRLSLGIAIAGNTK 612
            :|..:.:...|.|:...:.:. |:...|.|..|||....|....:||||.::||::.:.:..|..
  Rat   172 LTVQEAMMVSAHLKLQEKDEGRREMVKEILTALGLLPCANTRTGSLSGGQRKRLAIALELVNNPP 236

  Fly   613 IVILDEPSSGLDINSRRELWDILLNLRKEKAVLVTTHYMEEAEV--LGDTICILANGKLQSIGSP 675
            ::..|||:||||..|..::..::..|.:....:|.|.:...|::  |.|.:.:|:.|:..     
  Rat   237 VMFFDEPTSGLDSASCFQVVSLMKGLAQGGRSIVCTIHQPSAKLFELFDQLYVLSQGQCV----- 296

  Fly   676 LELKRKSGIGYRLKLEINDFTSREVEIMEIIHHFVPTARVLNVVNPTVYICLPYAYKNCFAQMLY 740
                      ||.|                :.:.||..|.|.:..||        |.|   ...:
  Rat   297 ----------YRGK----------------VSNLVPYLRDLGLNCPT--------YHN---PADF 324

  Fly   741 RLETESKELGIHTISMTDTSLEDVFLRCAGEQDQVDTPDGSRNDAPLLAHYKRLQDHPPHRGLFQ 805
            .:|..|.|.|.....:.....|.:   |..:..:....||..|  |.|.|....:|.....|.. 
  Rat   325 VMEVASGEYGDQNSRLVRAVREGM---CDSDYKRELGGDGDVN--PFLWHRPAEEDSASMEGCH- 383

  Fly   806 LWMAVFYKKWTFISNEWLYTLIMLCIPFVCVFGAILVMHAMSLVENEEALPLKL-SQMGSGVIYV 869
                      :|.::    .|...||.|...|        :|::.:.....|:: |.:|.|:   
  Rat   384 ----------SFSAS----CLTQFCILFKRTF--------LSIMRDSVLTHLRITSHIGIGL--- 423

  Fly   870 HNPTGHHAHLEQQLRQQIELNGITAKTMHLRGSNDVKNESLDLQRDNLADFLEQVIGIIDMYGGG 934
                               |.|:    ::|...|:.|.                   ::...|  
  Rat   424 -------------------LIGL----LYLGIGNEAKK-------------------VLSNSG-- 444

  Fly   935 RGTSDTPTIEIFYSGNRYHSSVELINLVDSAMLKLGRPESEIDTTYVPIRRFVSDISPSRLEYYA 999
                     .:|:|         ::.|:.:|::                        |:.|.:  
  Rat   445 ---------FLFFS---------MLFLMFAALM------------------------PTVLTF-- 465

  Fly  1000 VIVPIGMFFFMFYFISLPFREYANGFKQL------QTMS-------------RFTYWFAHFTFDM 1045
               |:.|..|:        ||:.|.:..|      :||:             ...||......|.
  Rat   466 ---PLEMSVFL--------REHLNYWYSLKAYYLAKTMADVPFQIMFPVAYCSIVYWMTSQPSDA 519

  Fly  1046 LILIFVCVALFSLQSLMMPS-ELYTTAELKVIVLSIFFYGCSYLPILYALGNNFKSISTISTYLL 1109
            :..: :..||.::.||:..| .|...|....:.::.|....:.:|:|...| .|.|..||.|||.
  Rat   520 VRFV-LFAALGTMTSLVAQSLGLLIGAASTSLQVATFVGPVTAIPVLLFSG-FFVSFDTIPTYLQ 582

  Fly  1110 LMLIVSAI 1117
            .|..:|.:
  Rat   583 WMSYISYV 590

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
EatoNP_001036360.1 ABC2_membrane_3 <209..347 CDD:289468
CcmA 460..767 CDD:224054 66/285 (23%)
ABC_subfamily_A 461..679 CDD:213230 50/197 (25%)
ABC2_membrane_3 <937..1117 CDD:289468 38/199 (19%)
ABC_subfamily_A 1255..1479 CDD:213230
drrA 1262..1573 CDD:130256
Abcg1NP_445954.2 3a01204 60..666 CDD:273361 130/658 (20%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
11.000

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