DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Eato and Abca2

DIOPT Version :9

Sequence 1:NP_001036360.1 Gene:Eato / 34783 FlyBaseID:FBgn0028539 Length:1597 Species:Drosophila melanogaster
Sequence 2:XP_006233707.2 Gene:Abca2 / 79248 RGDID:620238 Length:2435 Species:Rattus norvegicus


Alignment Length:2012 Identity:498/2012 - (24%)
Similarity:791/2012 - (39%) Gaps:617/2012 - (30%)


- Green bases have known domain annotations that are detailed below.


  Fly    36 GVLTAYLHWSVKPV----LHQINQFEAKNEMVLRELYFPGNELDYI------------------- 77
            |.|..:|||..:.|    ||.    ||.| :.|.||. |...|||.                   
  Rat   507 GRLQQHLHWLQQYVADLRLHP----EAMN-LSLDELP-PALRLDYFSLPNGTALLQQLDTIDNAA 565

  Fly    78 -----YYSPIS-------PNVEDIMDL-------------------LRVDLGIIPE---RLRPNN 108
                 :.|.:|       |:.|.|::.                   .|.|..:.|.   ::|.|:
  Rat   566 CGWIQFMSKVSVDIFKGFPDEESIVNYTLNQAYQDNVTVFASVIFQTRKDGSLPPHVHYKIRQNS 630

  Fly   109 NSFEMQLEMEQQCRGSCFAIDFHRVPNRGSDRKFRYSLSSNQMRISPRKRFVNDEEIYHQIDDDD 173
            :..|...|:.:..        :...||.|....|.|.....|..|  .:..:|....:..::..:
  Rat   631 SFTEKTNEIRRAY--------WRPGPNTGGRFYFLYGFVWIQDMI--ERAIINTFVGHDVVEPGN 685

  Fly   174 YIRSGFLSLQHILDKQYMKYQELGKD--FEVVVSSMPNMEVISMDSHRLTYFGTLCSILFNVVLL 236
            |:             |...|....:|  ..|:...||                 ||.::..|..:
  Rat   686 YV-------------QMFPYPCYTRDDFLFVIEHMMP-----------------LCMVISWVYSV 720

  Fly   237 SSFVVPFVEEKQNGLKEFLNLVTPMSFLNGLTFFLIRFVCYTLLMIFVLVVAYLYKALGSICFAY 301
            :..:...|.||::.|||.:..:...:.::.:.:|:..||   .|.|.|..:..:.|....:..::
  Rat   721 AMTIQHIVAEKEHRLKEVMKTMGLNNAVHWVAWFITGFV---QLSISVTALTAILKYGQVLMHSH 782

  Fly   302 VAVLFL---LYILSTMSYAYLISICFHSVFYAK-IGGLAMLI--IPYAFSFVRSWATSLAFVCF- 359
            |.:::|   :|.::|:.:.:|:|:.:.....|. .||:...:  :||.:..:|..........| 
  Rat   783 VLIIWLFLAVYAVATIMFCFLVSVLYSKAKLASACGGIIYFLSYVPYMYVAIREEVAHDKITAFE 847

  Fly   360 -------STNTF-----------LEGLDI-FQTFSNKRKNREFGAVDVFRVIKSNSSTMFSVYVV 405
                   ||..|           :.|:.| :.|||..             .::.:...:.....:
  Rat   848 KCIASLMSTTAFGLGSKYFALYEVAGVGIQWHTFSQS-------------PVEGDDFNLLLAVTM 899

  Fly   406 LVFQSFLYAMLYNYLGCVFPGPGGLKRPMFFFLDPKTYMKRQRNE-------YTTTPR------- 456
            |:..:.:|.:|..|:..|.||..||.||.:|.|....::...|.|       :...||       
  Rat   900 LMVDTVVYGVLTWYIEAVHPGMYGLPRPWYFPLQKSYWLGSGRTETWEWSWPWAHAPRLSVMEED 964

  Fly   457 -------------------GTH---AIIITELCKKFQTSKRDTLISDNLNMTINNKEITVLLGHN 499
                               .||   .:.:.:|.|.::..|:  |..:.|::.:...::...||||
  Rat   965 QACAMESRHFEETRGMEEEPTHLPLVVCVDKLTKVYKNDKK--LALNKLSLNLYENQVVSFLGHN 1027

  Fly   500 GAGKTTMMNMIMGLVPKDSGKIIVCS---ERDVASYRHLIGFCPQHSVFMSYMTCHQHLEFFAQL 561
            ||||||.|:::.||.|..||...:..   ..::...|..:|.||||:|....:|..:||.|:::|
  Rat  1028 GAGKTTTMSILTGLFPPTSGSATIYGHDIRTEMDEIRKNLGMCPQHNVLFDQLTVEEHLWFYSRL 1092

  Fly   562 RGACRSDARDWADEKLKKLGLSDKRNEFGKNLSGGMKRRLSLGIAIAGNTKIVILDEPSSGLDIN 626
            :...:.:.|...|:.::.|.||:||:...:.|||||||:||:.||..|.::.:|||||::|:|..
  Rat  1093 KSMAQEEIRKEMDKMIEDLELSNKRHSLVQTLSGGMKRKLSVAIAFVGGSRAIILDEPTAGVDPY 1157

  Fly   627 SRRELWDILLNLRKEKAVLVTTHYMEEAEVLGDTICILANGKLQSIGSPLELKRKSGIGYRL--- 688
            :||.:||::|..:..:.:|::||:|:||::|||.|.|:::|||:..||||.||...|.||||   
  Rat  1158 ARRAIWDLILKYKPGRTILLSTHHMDEADLLGDRIAIISHGKLKCCGSPLFLKGAYGDGYRLTLV 1222

  Fly   689 KLEINDFTSR------------------EVEIMEIIHHFVPTARVLNVVNPTVYICLP--YAYKN 733
            |......||:                  |:::.:.|...|.::.:::..:..:...||  ...|.
  Rat  1223 KRPAEPGTSQEPGMASSPSGRPQLSNCSEMQVSQFIRKHVASSLLVSDTSTELSYILPSEAVKKG 1287

  Fly   734 CFAQMLYRLETESKELGIHTISMTDTSLEDVFLRCAGEQDQVDTPDG----SRNDA--------- 785
            .|.::..:||.....|.:.:..:.||:||:|||:.:.|...::..:.    ||.||         
  Rat  1288 AFERLFQQLEHSLDALHLSSFGLMDTTLEEVFLKVSEEDQSLENSEADVKESRKDALPGAEGLTA 1352

  Fly   786 ----------------------------------------------PLLAHYKRLQDHPP----- 799
                                                          ||   :..|||...     
  Rat  1353 VESQAGNLARCSELAQSQASLQSASSVGSARGDEGAGYTDGYGDYRPL---FDNLQDPDSVSLQE 1414

  Fly   800 ------------HRGLFQLWM------AVFYKKWTFI--SNEWLYTLIMLCIPFVCVFGAILVMH 844
                        .|.|...|:      .:..|::...  :::.|.:.|:|...||||  |:.|  
  Rat  1415 AEMEALARVGQGSRKLEGWWLKMRQFHGLLVKRFHCARRNSKALCSQILLPAFFVCV--AMTV-- 1475

  Fly   845 AMSLVENEEALPLKLSQMGSGVIYVHN---------PTGHHAHLEQQLR-------QQI------ 887
            |:|:.|..:..||.||..     ..||         |..:....|.:||       ||:      
  Rat  1476 ALSVPEIGDLPPLVLSPS-----QYHNYTQPRGNFIPYANEERREYRLRLSPDASPQQLVSTFRL 1535

  Fly   888 ------------ELNGITAKTMHLRG-------------------------SNDV--------KN 907
                        ..||.....::|..                         ||.|        .:
  Rat  1536 PSGVGATCVLKSPANGSLGPMLNLSSGESRLLAARFFDSMCLESFTQGLPLSNFVPPPPSPAPSD 1600

  Fly   908 ESLDLQRDNL------------------------------------------------------- 917
            ..|....|:|                                                       
  Rat  1601 SPLSPDEDSLLAWNTSLPPTAGPETWTWAPSLPRLVHEPVRCTCSAQGTGFSCPSSVGGHPPQMR 1665

  Fly   918 ---ADFLEQVIG--------------IIDMYGG---GR---------GTSDTPTI---------- 943
               .|.|..:.|              .:..||.   |.         ||. ||.:          
  Rat  1666 VVTGDILTDITGHNVSEYLLFTSDRFRLHRYGAITFGNIQKSIPAPIGTR-TPLMVRKIAVRRVA 1729

  Fly   944 EIFYSGNRYHSSVELINLVDSAMLKLGRPESE-------IDTTYVPIRRFVSDISPSRLEY---- 997
            ::.|:...|||....:|.:::|:|:...|:|:       |..|..|:.:..:.:|   |:|    
  Rat  1730 QVLYNNKGYHSMPTYLNSLNNAILRANLPKSKGNPAAYGITVTNHPMNKTSASLS---LDYLLQG 1791

  Fly   998 ----YAVIVPIGMFFFMFYFISLPFREYANGFKQLQTMS---RFTYWFAHFTFDML--------- 1046
                .|:.:.:.|.|....|:.....|.:...|.||.:|   ...||.|::.:|||         
  Rat  1792 TDVVIAIFIIVAMSFVPASFVVFLVAEKSTKAKHLQFVSGCNPVIYWLANYVWDMLNYLVPATCC 1856

  Fly  1047 -ILIFVCVALFSLQSLMMPSELYTTAELKVIVLSIF-FYGCSYLPILYALGNNFKSISTISTYLL 1109
             |::||    |.|.:       ||:......|||:| .||.|..||:|.....|:..|  |.|:.
  Rat  1857 IIILFV----FDLPA-------YTSPTNFPAVLSLFLLYGWSITPIMYPASFWFEVPS--SAYVF 1908

  Fly  1110 LMLIVSAIAPLITSSNAA-AMKLHE-----------TKIAFLCFLPDFNLNHQF------RIINE 1156
            |::|...|.  ||::.|. .::|.|           .|..||.| |::||.|..      ..|||
  Rat  1909 LIVINLFIG--ITATVATFLLQLFEHDKDLKVVNSYLKSCFLIF-PNYNLGHGLMEMAYNEYINE 1970

  Fly  1157 ------NFITRRHP----ALIKGLISQDTFFAYATAVGVMVMAFFTIVLEHKYLRRRIHDGIWEW 1211
                  .|...:.|    .:.:||:        |..|...|..|.||:.::.:||:.        
  Rat  1971 YYAKIGQFDKMKSPFEWDIVTRGLV--------AMTVEGFVGFFLTIMCQYNFLRQP-------- 2019

  Fly  1212 AFQRKKYNSTGTLP--STPISEIDDCAREEKRV------TDLIKDPLNDHSLIVHNLRKRY---- 1264
              ||        ||  :.|:.:..|.|.|.:||      .|::|         :.||.|.|    
  Rat  2020 --QR--------LPVSTKPVEDDVDVASERQRVLRGDADNDMVK---------IENLTKVYKSRK 2065

  Fly  1265 -GDKLAVDGVSFAAAQGECFGLLGVNGAGKTSTFQMIAANLPLDGGTIRIKGADIREHELKYREY 1328
             |..||||.:......||||||||||||||||||:|:..:....||...:.|..:.:..|:.::.
  Rat  2066 IGRILAVDRLCLGVRPGECFGLLGVNGAGKTSTFKMLTGDESTTGGEAFVNGHSVLKDLLQVQQS 2130

  Fly  1329 FGYCPQYDALNKFMTAEQCLYYMALLRGLSRRRTDGPASCKEHVKYW-LEKMHLTKYQKVQVRHY 1392
            .|||||:|||...:||.:.|.....|||:       |...:..|..| |||:.|||........|
  Rat  2131 LGYCPQFDALFDELTAREHLQLYTRLRGI-------PWKDEAQVVRWALEKLELTKCADKPAGSY 2188

  Fly  1393 SGGTKRKLLAAMAMIGAPALVLLDEPTTGVDPISRRFLWQCIKDFQGKDRTVVLTSHSMDECEEL 1457
            |||.||||..|:|:||.||.:.|||||||:||.:|||||..|.|.....|:||||||||:|||.:
  Rat  2189 SGGNKRKLSTAIALIGYPAFIFLDEPTTGMDPKARRFLWNLILDLIKTGRSVVLTSHSMEECEAV 2253

  Fly  1458 CNRLAIMAHGKFKCLNNICALKRL--SGFTIKLKMKADTETEMNVSTITGTLKSEFPGLELRESH 1520
            |.|||||.:|:.:||.:|..||..  .|:.|.::    |::..||..:.......||...|:|.|
  Rat  2254 CTRLAIMVNGRLRCLGSIQHLKNRFGDGYMITVR----TKSSQNVKDVVRFFNRNFPEAMLKERH 2314

  Fly  1521 AGTLTYFVSTQESVVLWSSVFKIAEEYLGDRLSAL-VADYSVNECTLEDIFLKFEREAKSQS 1581
            ...:.|.:.::.  :..:.||...|..:|    .| :.||||::.||:::|:.|   ||.||
  Rat  2315 HTKVQYQLKSEH--ISLAQVFSKMEHVVG----VLGIEDYSVSQTTLDNVFVNF---AKKQS 2367

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
EatoNP_001036360.1 ABC2_membrane_3 <209..347 CDD:289468 27/143 (19%)
CcmA 460..767 CDD:224054 108/332 (33%)
ABC_subfamily_A 461..679 CDD:213230 82/220 (37%)
ABC2_membrane_3 <937..1117 CDD:289468 56/218 (26%)
ABC_subfamily_A 1255..1479 CDD:213230 107/229 (47%)
drrA 1262..1573 CDD:130256 130/319 (41%)
Abca2XP_006233707.2 rim_protein 1..2369 CDD:130324 498/2012 (25%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C166342280
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E2759_KOG0059
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 1 1.010 - - QHG53524
OrthoDB 1 1.010 - - D131191at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 1 0.900 - - OOG6_100045
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
65.660

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