DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Eato and Abca1

DIOPT Version :9

Sequence 1:NP_001036360.1 Gene:Eato / 34783 FlyBaseID:FBgn0028539 Length:1597 Species:Drosophila melanogaster
Sequence 2:XP_038965774.1 Gene:Abca1 / 313210 RGDID:631344 Length:2263 Species:Rattus norvegicus


Alignment Length:1887 Identity:473/1887 - (25%)
Similarity:802/1887 - (42%) Gaps:462/1887 - (24%)


- Green bases have known domain annotations that are detailed below.


  Fly    42 LHWSVKPVLHQINQFEAKNEMVLRELYFPGNELDYIYYSPISPNVEDIMDLLRV-------DLGI 99
            |.|:.:.::    .|.|||.   .::..|...: |.:....:...:.|..:.|.       .|..
  Rat   456 LDWTAQDIM----AFLAKNP---EDVQSPNGSV-YTWREAFNETNQAIQTISRFMECVNLNKLEP 512

  Fly   100 IPERLRPNNNSFEMQLEMEQQCRGSCF---AIDFHRVPNRGSDRKFRYSLSSNQMRISPRKRFVN 161
            ||..:|..|.|.|: |:..:...|..|   ..|...:|:.     .:|.:   :|.|...:|...
  Rat   513 IPTEVRLINKSMEL-LDERKFWAGIVFTGITPDSVELPHH-----VKYKI---RMDIDNVERTNK 568

  Fly   162 DEEIY-------HQIDDDDYIRSGFLSLQHILDKQYMK-YQELGKDFEVVVSSMP-----NMEVI 213
            .::.|       ...:|..|:..||..||.::::..:: .....|...|.|..||     :...:
  Rat   569 IKDGYWDPGPRADPFEDMRYVWGGFAYLQDVVEQAIIRVLTGTEKKTGVYVQQMPYPCYVDDIFL 633

  Fly   214 SMDSHRLTYFGTLCSILFNVVLLSSFVVPFVEEKQNGLKEFLNLVTPMSFLNGLTFF------LI 272
            .:.|..:..|.||..|....|::.|.|.    ||:..|||.:.:   |...||:.:|      ||
  Rat   634 RVMSRSMPLFMTLAWIYSVAVIIKSIVY----EKEARLKETMRI---MGLDNGILWFSWFISSLI 691

  Fly   273 RFVCYTLLMIFVLVVAYLYK-ALGSICFAYVAVLFLLYILSTMSYAYLISICF-HSVFYAKIGGL 335
            ..:....|::.:|.:..|.. :..|:.|.:::|..::.||.    .:|||..| .:...|..||:
  Rat   692 PLLVSAGLLVIILKLGDLLPYSDPSVVFVFLSVFAVVTILQ----CFLISTLFSRTNLAAACGGI 752

  Fly   336 A--MLIIPY----------AFSFVRSWATSLAFVCFSTNTFLEGLDIFQTFSNKRKNREFGAVDV 388
            .  .|.:||          .|| ::.:|:.|:.|.|..     |.:.|..|..:....::.  ::
  Rat   753 IYFTLYLPYVLCVAWQDYVGFS-IKIFASLLSPVAFGF-----GCEYFALFEEQGIGVQWD--NL 809

  Fly   389 FR-VIKSNSSTMFSVYVVLVFQSFLYAMLYNYLGCVFPGPGGLKRPMFF----------FLDPKT 442
            |: .::.:...:.:...:::|.:|:|.::..|:..||||..|:.||.:|          .:|.|:
  Rat   810 FKSPVEEDGFNLTTSVSMMLFDTFIYGVMTWYIEAVFPGQYGIPRPWYFPCTKSYWFGEEIDEKS 874

  Fly   443 Y---MKRQRNEYTTTPRGTH---AIIITELCKKFQTSKRDTLISDNLNMTINNKEITVLLGHNGA 501
            :   .::..:|.......||   .:.|..|.|.::...:  :..|.|.:.....:||..||||||
  Rat   875 HPGSSQKGASEICMEEEPTHLKLGVSIQNLVKVYRDGMK--VAVDGLALNFYEGQITSFLGHNGA 937

  Fly   502 GKTTMMNMIMGLVPKDSGKIIVCSE---RDVASYRHLIGFCPQHSVFMSYMTCHQHLEFFAQLRG 563
            ||||.|:::.||.|..||...:..:   .::.|.|..:|.||||:|....:|..:|:.|:|:|:|
  Rat   938 GKTTTMSILTGLFPPTSGTAYILGKDIRSEMNSIRQNLGVCPQHNVLFDMLTVEEHIWFYARLKG 1002

  Fly   564 ACRSDARDWADEKLKKLGL-SDKRNEFGKNLSGGMKRRLSLGIAIAGNTKIVILDEPSSGLDINS 627
            ......:...::....:|| ..|.......|||||:|:||:.:|..|.:|:||||||::|:|..|
  Rat  1003 LSEKHVKAEMEQMALDVGLPPSKLKSKTSQLSGGMQRKLSVALAFVGGSKVVILDEPTAGVDPYS 1067

  Fly   628 RRELWDILLNLRKEKAVLVTTHYMEEAEVLGDTICILANGKLQSIGSPLELKRKSGIGYRLKLEI 692
            ||.:|::||..|:.:.::::||:|:||::|||.|.|:::|||..:||.|.||.:.|.||.|.|..
  Rat  1068 RRGIWELLLKYRQGRTIILSTHHMDEADILGDRIAIISHGKLCCVGSSLFLKNQLGTGYYLTLVK 1132

  Fly   693 NDFTSR--------------------------------EVE-----------IMEIIHHFVPTAR 714
            .|..|.                                ||:           |..:|...|..||
  Rat  1133 KDVESSLSSCRNSSSTVSCLKKVVPELPAAGQSGGRGGEVQRLVALTQDVSAISNLIRKHVSEAR 1197

  Fly   715 VLNVVNPTVYICLPY--AYKNCFAQMLYRLETESKELGIHTISMTDTSLEDVFLRCAGEQDQVD- 776
            ::..:...:...|||  |.:..|.::.:.::....:|||.:..:::|:||::||:.| |:..|| 
  Rat  1198 LVEDIGHELTYVLPYEAAKEGAFVELFHEIDDRLSDLGISSYGISETTLEEIFLKVA-EESGVDA 1261

  Fly   777 -TPDGSRNDAPLLAHYKRLQD-----HP--------PH-------------------RGLFQL-- 806
             |.||:   .|...:.:...|     ||        |:                   :|.:||  
  Rat  1262 ETSDGT---LPARRNRRAFGDKQSCLHPFTEDDAVDPNDSDLDPESRETDLLSGMDGKGSYQLKG 1323

  Fly   807 W-------MAVFYKKWTFI--SNEWLYTLIMLCIPFVCV----------FGAILVMHAMSLVENE 852
            |       :|:.:|:....  |.:..:..|:|...|||:          ||....:.....:.||
  Rat  1324 WKLTQQQFVALLWKRLLIARRSRKGFFAQIVLPAVFVCIALVFSLIVPPFGKYPNLELQPWMYNE 1388

  Fly   853 ---------------------------------EALPL--------------------------- 857
                                             |..|:                           
  Rat  1389 QYTFVSNDAPEDMGTQELLNALTKDPGFGTRCMEGNPIPNTPCLVGEEDWTTGPVPQTLMDLFQN 1453

  Fly   858 -----------------KLSQM------GSGVI-----------YVHNPTGHHAH---------- 878
                             |:.:|      |:|.:           .:.|.||.:..          
  Rat  1454 GNWTMKNPSPSCQCSSDKIKKMLPVCPPGAGGLPPPQRKQKTADILQNLTGRNISDYLVKTYVQI 1518

  Fly   879 LEQQLRQQIELN---------GITAKTMHLRGSNDVKN------ESLDLQRDNLAD-FLEQVIGI 927
            :.:.|:.::.:|         |: :.:..|..|.:|.|      :.|.|.:|:.|| ||..:   
  Rat  1519 IAKSLKNKVWVNEFRYGGFSLGV-SDSQALPPSQEVNNAIKQMKKLLKLTKDSSADRFLSSL--- 1579

  Fly   928 IDMYGGGR---GTSDTPTIEIFYSGNRYHSSVELINLVDSAMLKLGRPESEIDTTY-VPIRRFVS 988
                  ||   |......::::::...:|:....:|::::|:|:....:.|..:.| :.......
  Rat  1580 ------GRFMTGLDTKNNVKVWFNNKGWHAISSFLNVINNAILRANLQKGENPSQYGITAFNHPL 1638

  Fly   989 DISPSRLEYYA-------VIVPIGMFFFMFY----FISLPFREYANGFKQLQ---TMSRFTYWFA 1039
            :::..:|...|       |:|.|.:.|.|.:    |:....:|..:..|.||   .:....||.:
  Rat  1639 NLTKQQLSEVALMTTSVDVLVSICVIFAMSFVPASFVVFLIQERVSKAKHLQFICGVKPVIYWLS 1703

  Fly  1040 HFTFDM---------LILIFVCVALFSLQSLMMPSELYTTAELKVIVLSIFFYGCSYLPILYALG 1095
            :|.:||         :::||:|   |..:|.:      ::..|.|:.|.:..||.|..|::|...
  Rat  1704 NFVWDMCNYVVPATLVVIIFIC---FQQKSYV------SSTNLPVLALLLLLYGWSITPLMYPAS 1759

  Fly  1096 NNFKSISTISTYLLLMLIVSAIAPLITSSNAAAMKLHETKIAFLCFLPDFNLNHQFRIINE---- 1156
            ..||..||  .|::|..:...|.  |..|.|.             |:.:...|::|..||:    
  Rat  1760 FVFKIPST--AYVVLTSVNLFIG--INGSVAT-------------FVLELFTNNKFNDINDILKS 1807

  Fly  1157 NFITRRHPALIKGLI---------------SQDTFFA-----------YATAVGVMVMAFFTIVL 1195
            .|:...|..|.:|||               .::.|.:           :|.||..:|....|:::
  Rat  1808 VFLIFPHFCLGRGLIDMVKNQAMADALERFGENRFVSPLSWDLVGRNLFAMAVEGVVFFLVTVLI 1872

  Fly  1196 EHKYLRRRIHDGIWEWAFQRKKYNSTGTLPSTPISEID-DCAREEKRVTDLIKDPLNDHSLIVHN 1259
            ::::             |.|.: .....||  |:::.| |..||.:|:  |.....|| .|.:..
  Rat  1873 QYRF-------------FIRPR-PVKARLP--PLNDEDEDVRRERQRI--LEGGGQND-ILEIKE 1918

  Fly  1260 LRKRYGDKL--AVDGVSFAAAQGECFGLLGVNGAGKTSTFQMIAANLPLDGGTIRIKGADIREHE 1322
            |.|.|..|.  |||.:......||||||||||||||||||:|:..:..:..|...:....|..:.
  Rat  1919 LTKIYRRKRKPAVDRICVGIPPGECFGLLGVNGAGKTSTFKMLTGDTAVTRGDALLNKNSILSNI 1983

  Fly  1323 LKYREYFGYCPQYDALNKFMTAEQCLYYMALLRGLSRRRTDGPASCKEHVKYW-LEKMHLTKYQK 1386
            .:..:..|||||:||:.:.:|..:.|.:.|||||:..:...       .|..| :.|:.|.||.:
  Rat  1984 HEVHQNMGYCPQFDAITELLTGREHLEFFALLRGVPEKEVG-------KVGEWAIRKLGLVKYGE 2041

  Fly  1387 VQVRHYSGGTKRKLLAAMAMIGAPALVLLDEPTTGVDPISRRFLWQCIKDFQGKDRTVVLTSHSM 1451
            ....:||||.||||..|:|:||.|.:|.|||||||:||.:|||||.|......:.|:||||||||
  Rat  2042 KYASNYSGGNKRKLSTAIALIGGPPVVFLDEPTTGMDPKARRFLWNCALSIIKEGRSVVLTSHSM 2106

  Fly  1452 DECEELCNRLAIMAHGKFKCLNNICALKRL--SGFTIKLKMKADTETEMNVSTITGTLKSEFPGL 1514
            :|||.||.|:|||.:|:|:||.::..||..  .|:||.:::.........|....|.   .|||.
  Rat  2107 EECEALCTRMAIMVNGRFRCLGSVQHLKNRFGDGYTIVVRIAGSNPDLKPVQEFFGL---AFPGS 2168

  Fly  1515 ELRESHAGTLTYFVSTQESVVLWSSVFKIAEEYLGDRLSALVADYSVNECTLEDIFLKFEREAKS 1579
            .|:|.|...|.|.:.:..|.:  :.:|.|..:   .:....:.||||::.||:.:|:.|   ||.
  Rat  2169 VLKEKHRNMLQYQLPSSLSSL--ARIFSILSQ---SKKRLHIEDYSVSQTTLDQVFVNF---AKD 2225

  Fly  1580 QS 1581
            ||
  Rat  2226 QS 2227

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
EatoNP_001036360.1 ABC2_membrane_3 <209..347 CDD:289468 39/157 (25%)
CcmA 460..767 CDD:224054 110/355 (31%)
ABC_subfamily_A 461..679 CDD:213230 82/221 (37%)
ABC2_membrane_3 <937..1117 CDD:289468 42/203 (21%)
ABC_subfamily_A 1255..1479 CDD:213230 100/226 (44%)
drrA 1262..1573 CDD:130256 123/315 (39%)
Abca1XP_038965774.1 rim_protein 1..2238 CDD:130324 473/1887 (25%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C166342286
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 1 1.010 - - QHG53524
OrthoDB 1 1.010 - - D131191at2759
OrthoFinder 1 1.000 - - FOG0000051
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 1 0.900 - - OOG6_100045
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
76.760

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