DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Eato and Abca13

DIOPT Version :9

Sequence 1:NP_001036360.1 Gene:Eato / 34783 FlyBaseID:FBgn0028539 Length:1597 Species:Drosophila melanogaster
Sequence 2:XP_038948786.1 Gene:Abca13 / 289797 RGDID:1305895 Length:5037 Species:Rattus norvegicus


Alignment Length:1829 Identity:460/1829 - (25%)
Similarity:768/1829 - (41%) Gaps:386/1829 - (21%)


- Green bases have known domain annotations that are detailed below.


  Fly    42 LHWS-VKPVLHQINQFEAKNEMVLRELYFPG----NEL----DYIYY------------------ 79
            |.|| :|||||.            :.||.|.    ||:    :|.:|                  
  Rat  3279 LVWSFLKPVLHG------------KILYTPNSPEINEVIQKANYTFYFVDKIKILSETFLKMSSL 3331

  Fly    80 ---SPISPNVEDIMDLLR-------------VDLGIIPERLRPNNNSFE-MQLEMEQ---QCRG- 123
               |......:.:.|.||             :|:..:.|.|:......: |...||.   |..| 
  Rat  3332 FQESGNGQMFKQLQDALRNKFIRNFVESQLHIDMDKLTEDLQTYGQKLDKMFNHMEAGNFQFLGG 3396

  Fly   124 ------SCFAID--------------FHRVPNRGS---DRKFRYSLSSNQMRISPRK-----RFV 160
                  ||..:|              .|.:..:.|   ...|..||....:|.:|.|     .:.
  Rat  3397 ILANLSSCVLLDRFQAVETVDTLETKAHELMQQNSFLASIIFNSSLGHRHIRSAPHKLPPHVTYT 3461

  Fly   161 NDEEIYHQIDDD---------------------DYIRSGFLSLQHILDKQYMKYQELGKDFEVVV 204
            ....|.:.:..|                     :||   |:.||.::::..:..|...:..|...
  Rat  3462 IRTNILYSMRTDMIKNPSWKFHPQNLPASGFKYNYI---FVPLQDMIERAIIVVQTGQESLEPTA 3523

  Fly   205 SSMP---NMEVISMDSHRLTYFGTLCSILFNVVLLSSFVVPFVEEKQNGLKEFLNLVTPMSFLNG 266
            .:..   ......:..:.:.:|..|..:|..:|.::|.|...|.|::..::|::.::.....::.
  Rat  3524 QAQAAPYPCHTSDLFLNNVGFFFPLIMMLTWMVSVASMVRKLVYEREIQIEEYMRIMGLHPVIHF 3588

  Fly   267 LTFFLIRFVCYTLLMIFVLVVAYLYKALGSICFAYVAVLFLLYILSTMSYAYLISICFHSVFYAK 331
            |::||...   ..|.:....:|.:.|..|....:...::| ||:|:....|.::|. |.|||:.|
  Rat  3589 LSWFLENM---ATLALSSAALALILKMSGIFMHSDAFIIF-LYLLNFGVSAVMLSY-FLSVFFNK 3648

  Fly   332 IG--------GLAMLIIPYAFSFV----RSWATSLAFVCFSTNTFLEGLDIFQTFSNKRKNREFG 384
            ..        |..:..:||....|    .|:|........||..|.:|:........:.:..::|
  Rat  3649 ANTAALCTSLGYMISFLPYVVLLVLHNQLSFALQTLLCLLSTTAFGQGVFFITFLEGQEEGIQWG 3713

  Fly   385 AVDVFRVIKSNSSTMFSVYVVLVFQSFLYAMLYNYLGCVFPGPGGLKRPMFFFLDPKT--YMK-- 445
              :::|..:....|...|..:::|.|.||.:...|...:.||..||.:|.:|   |.|  |.|  
  Rat  3714 --NMYRAPEPGGMTFGWVCWMILFDSILYFLGGWYFSNLVPGTFGLGKPWYF---PFTASYWKSI 3773

  Fly   446 ---------------------------RQRNEYTTTPRGTHAIIITELCKKFQTSKRDTLISDNL 483
                                       .|:|.......|:..:.:..:.|:::..|   :....|
  Rat  3774 CGLMERRRCSLSSGLFFFNEDFGNKGLSQQNGPGEMEGGSPGVALISVTKEYEDHK---VAVQEL 3835

  Fly   484 NMTINNKEITVLLGHNGAGKTTMMNMIMGLVPKDSGKIIVCS---ERDVASYRHLIGFCPQHSVF 545
            .:|.:..:||.|||.|||||||:::|:|||.|..||.|||..   :.|.:..|..:|.||||.|.
  Rat  3836 TLTFHRDQITALLGTNGAGKTTIISMLMGLFPPTSGTIIVNGKNLQTDFSKVREELGVCPQHDVL 3900

  Fly   546 MSYMTCHQHLEFFAQLRGA--CRSDARDWADEKLKKLGLSDKRNEFGKNLSGGMKRRLSLGIAIA 608
            :..:|..:||..||.::..  ...:.|...::.|:::.|:..:::..:.|||||||:||:|||..
  Rat  3901 LDNLTVREHLMLFASIKAPWWTNKELRQQVNKTLEEVELTQHQHKPARVLSGGMKRKLSIGIAFM 3965

  Fly   609 GNTKIVILDEPSSGLDINSRRELWDILLNLRKEKAVLVTTHYMEEAEVLGDTICILANGKLQSIG 673
            |.:|.|:|||||||:|..|||.||:|||..||.:.::.|||:::|||||.|.:.:|..|:|:...
  Rat  3966 GMSKTVVLDEPSSGVDPCSRRSLWNILLKYRKGRTIIFTTHHLDEAEVLSDHVAVLQQGRLRCYA 4030

  Fly   674 SPLELKRKSGIGYRLKLEINDFTSREVEIME------------IIHHFVPTARVLNVVNPTVYIC 726
            .|..||...|.|..|.|      |::..::|            :|..::|.|.:.:.....:...
  Rat  4031 PPAGLKETYGQGLTLTL------SKQPSVLESQEPKDVARVTSLIQVYIPQAFLKDSNGGELTYT 4089

  Fly   727 LPY-AYKNCFAQMLYRLETESKELGIHTISMTDTSLEDVFLRCAGEQDQVD--TPDG---SRNDA 785
            :|. |.|.||..:...|:...:.|.:....::||:||:|||....:.::..  |||.   |:|:.
  Rat  4090 IPKDADKTCFKGLCQALDQNLQHLHLTGYGISDTTLEEVFLMLLQDTNKKSYITPDNKLESQNEK 4154

  Fly   786 PL---LAH----YKRLQDH-PPHRGLFQLWM----AVFYKKWTFISNEWLYTLIMLCIP--FVCV 836
            |:   |.|    .:.|.|. |...|..||.:    |:..|:.......|..|...|.:|  ||.:
  Rat  4155 PVGPCLRHCGSLMRTLPDSLPEPMGGCQLLLGQAGALLRKRLLHTLRAWKSTTSDLFLPVLFVAL 4219

  Fly   837 FGAILVMHAMSLVENEEALPLKLS--QMGSGVIYVHNPTGHHAHLEQQLRQQI--------ELNG 891
            ...:.::..:::...    ||||:  ...:...|..:...|...|...|.::.        :...
  Rat  4220 AMGLFMVQPLAITYP----PLKLTPGHYETAEAYFFSSGNHDPDLTHVLLRRFGDQDPVCSDAQW 4280

  Fly   892 ITAKTMHLR-----------GSNDVKNESLDLQRDNLADFLEQVIG--IIDMYG----------- 932
            :.:.:.|..           |.....|:|..      |.:|...:|  ::::.|           
  Rat  4281 VNSSSWHRDPYSGPEFQDSCGCLKCPNKSAG------APYLTNCLGHTLLNLSGYDVEEYLLVPS 4339

  Fly   933 -----GG---------------RGTSDTPTI-EIFYSGNRYHSSVELINLVDSAMLKLGRPESEI 976
                 ||               ..||...|: :::|:...:||....:|.:::.:|....|....
  Rat  4340 AKPRLGGWSFGVQIPNEAEDVKTNTSKPKTLAKVWYNQKGFHSLPSYLNHLNNLILWQNLPAHAA 4404

  Fly   977 DTTYVPIRRFVSDISPSRLEY-----------YAVIVPIGMFFFMFYFISLPFREYANGFKQLQT 1030
            |.....|..:......:.|..           .|:.:.:|.........|...::...|.|:||.
  Rat  4405 DWRQYGITLYSHPYGGALLNEDRILESIRQCGVALCIVLGFSILSASIGSSVVKDRVTGAKRLQH 4469

  Fly  1031 MSRF---TYWFAHFTFDMLI-LIFVC-----VALFSLQSLMMPSELYTTAELKVIVLSIFFYGCS 1086
            :|..   |||..:|.:|||. |:.||     :|.|.|.:......|..||    ::|::|  |.:
  Rat  4470 ISGLGYRTYWLINFLYDMLFYLVSVCLCVAIIAAFQLTAFTFRENLAATA----LLLALF--GYA 4528

  Fly  1087 YLPILYALGNNFKS--ISTISTYLLLMLIVSAIAPLITS--------SNAAAM-KLHET-KIAFL 1139
            .:|.:|.:...|.|  ::.|| |:.|..|......|:|:        |.|.:: |:::. |..|.
  Rat  4529 MIPWMYLISRIFSSSDVAFIS-YISLNFIFGLCTMLMTTMPRLLAIISKAQSLQKIYDVLKWVFT 4592

  Fly  1140 CFLPDF----------------NLNHQFRIINENFITRRHPALIKGLISQDTFFAYATAVGVMVM 1188
            .| |.|                :|.|.|.|  :::::   |..|..|   ...|...|..|..::
  Rat  4593 IF-PQFCLGQGLIELCYNQIKYDLTHNFGI--DSYVS---PFEINFL---GWIFVELTLQGTFLL 4648

  Fly  1189 AFFTIVLEHKYLRRRIHDGIWEWAFQRKKYNSTGTLPSTPISEIDDCAREEKRVTDLIKDPLNDH 1253
                      .||..:|.....|.   :.:::...:.. |:.:| |..:|:.||   ::......
  Rat  4649 ----------LLRILLHGDCLRWP---RGHSALQDIVK-PVKDI-DVEKEQMRV---LEGRTGGD 4695

  Fly  1254 SLIVHNLRKRY-----GDKLAVDGVSFAAAQGECFGLLGVNGAGKTSTFQMIAANLPLDGG--TI 1311
            .|::.||.|.|     |...||.|:|...::||||||||||||||::||:::....|...|  ||
  Rat  4696 MLVLCNLSKSYRGVCRGKTTAVHGISLGISRGECFGLLGVNGAGKSTTFKILNGETPPSSGYATI 4760

  Fly  1312 RIKGADIRE--HELKYREYFGYCPQYDALNKFMTAEQCLYYMALLRGLSRRRTDGPASCKEHVKY 1374
            |....|:.:  ...|.....|||||.|||::.:|..:.|.|...|||:.::..  |....:.|: 
  Rat  4761 RTPQGDMVDLASAGKVGVLIGYCPQQDALDELLTGWEHLQYYCRLRGIPKQNI--PEVAADLVR- 4822

  Fly  1375 WLEKMHLTKYQKVQVRHYSGGTKRKLLAAMAMIGAPALVLLDEPTTGVDPISRRFLWQCIKDFQG 1439
               ::||..:....|..|||||:|||..|:|::|.|.::|||||::|:||.|:|:|||.|.....
  Rat  4823 ---RLHLELHVDKPVATYSGGTRRKLSTALALVGKPDILLLDEPSSGMDPCSKRYLWQTITQEVR 4884

  Fly  1440 KDRTVVLTSHSMDECEELCNRLAIMAHGKFKCLNNICALKRL--SGFTIKLKMKADTETEMNVST 1502
            .....|||||||:|||.||.|||||..|.|:||.:...:|..  .|:|:|:.:..:..   ..|.
  Rat  4885 DGCAAVLTSHSMEECEALCTRLAIMVDGSFRCLGSPQHIKNRFGDGYTVKVWLHKEGS---QPSA 4946

  Fly  1503 ITGTLKSEFPGLELRESHAGTLTYFVSTQESVVLWSSVFKIAEEYLGDRLSALVADYSVNECTLE 1567
            ::..||..|||::.:......|.|.|  |:|......:|::.|.   ::....:..||:::..||
  Rat  4947 VSDCLKLHFPGIQFKGQRLNLLEYHV--QKSWECLPDLFRVLET---NKSLLKIEHYSISQTALE 5006

  Fly  1568 DIFLKFERE 1576
            .:|:.|..|
  Rat  5007 QVFVNFATE 5015

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
EatoNP_001036360.1 ABC2_membrane_3 <209..347 CDD:289468 30/145 (21%)
CcmA 460..767 CDD:224054 112/324 (35%)
ABC_subfamily_A 461..679 CDD:213230 88/222 (40%)
ABC2_membrane_3 <937..1117 CDD:289468 48/202 (24%)
ABC_subfamily_A 1255..1479 CDD:213230 99/232 (43%)
drrA 1262..1573 CDD:130256 118/321 (37%)
Abca13XP_038948786.1 rim_protein 1..>82 CDD:130324
rim_protein 3042..5029 CDD:130324 460/1829 (25%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C166342282
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D131191at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 1 0.900 - - OOG6_100045
Panther 1 1.100 - - O PTHR19229
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
54.850

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