DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG16890 and Fra10ac1

DIOPT Version :9

Sequence 1:NP_609671.1 Gene:CG16890 / 34781 FlyBaseID:FBgn0028932 Length:258 Species:Drosophila melanogaster
Sequence 2:XP_038941565.1 Gene:Fra10ac1 / 365458 RGDID:1309482 Length:323 Species:Rattus norvegicus


Alignment Length:256 Identity:106/256 - (41%)
Similarity:156/256 - (60%) Gaps:25/256 - (9%)


- Green bases have known domain annotations that are detailed below.


  Fly    14 LSAKERHNYILSNYVLNLPNETE-----SRRHKRDIDVIRENHRFLW-EDDELDSDTLSWEQRLA 72
            :.|.:||...:::|:|....:.|     ....|.|:||||||||||| |:||.|   ::||:|||
  Rat    78 MDAYQRHTKFVNDYILYYGGKREDFKRLGENDKTDLDVIRENHRFLWNEEDEAD---MTWEKRLA 139

  Fly    73 LRYYRKLFKEYCIADLSRYKENKIALRWRTEQEVVTGTGQFQCGSRHCGERDNLRSWEVNFRYIE 137
            .:||.||||||||||||||||||...|||.|:||::|.|||.||::.|.|::.|:||||||.|.|
  Rat   140 KKYYDKLFKEYCIADLSRYKENKFGFRWRIEKEVISGKGQFFCGNKCCDEKEGLKSWEVNFGYTE 204

  Fly   138 KGEPLNALVKVRLCPTHTDQLNYRTKKRECKKRRRREKEERRAEKKRKRRKLDVGHESSGEEEEE 202
            .||..|||||:|||...:.:||:..:::|.|..::|.|.:..:::...:       .|.....||
  Rat   205 HGEKRNALVKLRLCQECSFKLNFHHRRKEIKSTKKRSKTKTESDESPHK-------NSRSSSSEE 262

  Fly   203 PVEPASESHPEASKEPTDSKDA-------TTADEQIWQQQPDISREQASREQEFERYLEDL 256
            ..:...|.| .:||...||::.       :.:|.::| :.|....::.|:|:||:.|.:||
  Rat   263 ASQGKDEGH-SSSKRSEDSRNTGNAGEEDSASDSELW-KGPLPETDEKSQEEEFDDYFQDL 321

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG16890NP_609671.1 Fra10Ac1 42..156 CDD:286768 74/114 (65%)
Fra10ac1XP_038941565.1 Fra10Ac1 111..223 CDD:401606 74/114 (65%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C166340553
Domainoid 1 1.000 161 1.000 Domainoid score I3946
eggNOG 1 0.900 - - E1_KOG1297
Hieranoid 1 1.000 - -
Homologene 1 1.000 - - H13852
Inparanoid 1 1.050 202 1.000 Inparanoid score I3688
OMA 1 1.010 - - QHG49260
OrthoDB 1 1.010 - - D1444601at2759
OrthoFinder 1 1.000 - - FOG0006262
OrthoInspector 1 1.000 - - oto96955
orthoMCL 1 0.900 - - OOG6_104275
Panther 1 1.100 - - LDO PTHR11567
Phylome 1 0.910 - -
SonicParanoid 1 1.000 - - X4544
SwiftOrtho 1 1.000 - -
TreeFam 1 0.960 - -
1615.770

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