DRSC/TRiP Functional Genomics Resources

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Protein Alignment p38b and Mapk6

DIOPT Version :9

Sequence 1:NP_477361.1 Gene:p38b / 34780 FlyBaseID:FBgn0024846 Length:365 Species:Drosophila melanogaster
Sequence 2:NP_113810.2 Gene:Mapk6 / 58840 RGDID:62087 Length:720 Species:Rattus norvegicus


Alignment Length:374 Identity:130/374 - (34%)
Similarity:206/374 - (55%) Gaps:46/374 - (12%)


- Green bases have known domain annotations that are detailed below.


  Fly     5 MAKFYKLDINRTEWEIPETYQNLQPVGQGAYGQVCKAVVRGTSTKVAIKK--LARPFQSAVHAKR 67
            ||:.::..:|...:::...|.:|:|:|.|..|.|..||......:|||||  |..| ||..||  
  Rat     1 MAEKFESLMNIHGFDLGSRYMDLKPLGCGGNGLVFSAVDNDCDKRVAIKKIVLTDP-QSVKHA-- 62

  Fly    68 TYRELRLLKHMDHENVIGLLDVFHP--GQPAD---SLDQFQQVYMVTHLMDADLNNIIRTQKLSD 127
             .||:::::.:||:|::.:.::..|  .|..|   ||.:...||:|...|:.||.|::....|.:
  Rat    63 -LREIKIIRRLDHDNIVKVFEILGPSGSQLTDDVGSLTELNSVYIVQEYMETDLANVLEQGPLLE 126

  Fly   128 DHVQFLVYQILRGLKYIHSAGVIHRDLKPSNIAVN-EDCELRILDFGLARPAESEMT--GYVA-- 187
            :|.:..:||:||||||||||.|:||||||:|:.:| ||..|:|.||||||..:...:  |:::  
  Rat   127 EHARLFMYQLLRGLKYIHSANVLHRDLKPANLFINTEDLVLKIGDFGLARIMDPHYSHKGHLSEG 191

  Fly   188 --TRWYRAPEIMLNWMHYNQTADIWSVGCIMAELLTGRTLFPGTDHIHQLNLIMEVLGTPADEFM 250
              |:|||:|.::|:..:|.:..|:|:.|||.||:|||:|||.|...:.|:.||:|.:....:|..
  Rat   192 LVTKWYRSPRLLLSPNNYTKAIDMWAAGCIFAEMLTGKTLFAGAHELEQMQLILESIPVVHEEDR 256

  Fly   251 SRISSESARNYIRSLPVMPRRNFRDIFRGANPLAIDLLEKMLELDADKRITAEQALAHPYMEKYH 315
            ..:.| ....|||:....|.:....:..|.:..|:|.||::|......|:|||:||:||||..|.
  Rat   257 QELLS-VIPVYIRNDMTEPHKPLTQLLPGISREALDFLEQILTFSPMDRLTAEEALSHPYMSIYS 320

  Fly   316 DPTDEQTAA---------------------------LYDQSFEENELPV 337
            .||||..::                           .:|..|.|::.|:
  Rat   321 FPTDEPISSHPFHIEDEVDDILLMDETHSHIYNWERYHDCQFSEHDWPI 369

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
p38bNP_477361.1 STKc_p38 8..353 CDD:143356 128/371 (35%)
S_TKc 24..311 CDD:214567 116/300 (39%)
Mapk6NP_113810.2 STKc_MAPK4_6 14..355 CDD:143359 123/345 (36%)
S_TKc 20..316 CDD:214567 116/300 (39%)
SEG motif 189..191 0/1 (0%)
FRIEDE motif 332..337 0/4 (0%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 638..657
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 698..720
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG0660
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
32.810

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