DRSC/TRiP Functional Genomics Resources

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Protein Alignment p38b and mapk6

DIOPT Version :9

Sequence 1:NP_477361.1 Gene:p38b / 34780 FlyBaseID:FBgn0024846 Length:365 Species:Drosophila melanogaster
Sequence 2:NP_001039017.1 Gene:mapk6 / 565830 ZFINID:ZDB-GENE-050420-7 Length:729 Species:Danio rerio


Alignment Length:379 Identity:132/379 - (34%)
Similarity:206/379 - (54%) Gaps:55/379 - (14%)


- Green bases have known domain annotations that are detailed below.


  Fly     5 MAKFYKLDINRTEWEIPETYQNLQPVGQGAYGQVCKAVVRGTSTKVAIKK--LARPFQSAVHAKR 67
            ||:.::..:|...:::...|.:|:|:|.|..|.|..||......:||:||  |..| ||..||  
Zfish     1 MAEKFESLMNIHGFDLGPRYMDLKPLGYGGNGLVFSAVDTDCDKRVAVKKIVLTDP-QSVKHA-- 62

  Fly    68 TYRELRLLKHMDHENVIGLLDVFHPG-----QPADSLDQFQQVYMVTHLMDADLNNIIRTQKLSD 127
             .||:::::.:||:|::.:.:...|.     :...||.:...||:|...|:.||..::....||:
Zfish    63 -LREIKIIRRLDHDNIVKVFETLGPSGRRLTEDVSSLTEVNSVYIVQEYMETDLCKVLEQGLLSE 126

  Fly   128 DHVQFLVYQILRGLKYIHSAGVIHRDLKPSNIAVN-EDCELRILDFGLARPAESEMT--GYVA-- 187
            ||.:..:||:||||||||||.|:||||||:|:.|| ||..|:|.||||||..:...:  |:::  
Zfish   127 DHARLFMYQLLRGLKYIHSANVLHRDLKPANLFVNTEDLVLKIGDFGLARIMDPHYSHKGHLSEG 191

  Fly   188 --TRWYRAPEIMLNWMHYNQTADIWSVGCIMAELLTGRTLFPGTDHIHQLNLIMEVLGTPADEFM 250
              |:|||:|.::|:..:|.:..|:|:.|||.||:|||:|||.|...:.|:.||:|.:....:|  
Zfish   192 LVTKWYRSPRLLLSPNNYTKAIDMWAAGCIFAEMLTGKTLFAGAHELEQMQLILESIPVVHEE-- 254

  Fly   251 SRISSESARNYIRSLPVM-------PRRNFRDIFRGANPLAIDLLEKMLELDADKRITAEQALAH 308
            .|:..:|.      :||.       |......:..|.:|.|:|.|||:|..:...|:|||:||||
Zfish   255 DRLELQSV------IPVFIKNDMSEPHTPLAKLLPGVSPEALDFLEKILTFNPMDRLTAEEALAH 313

  Fly   309 PYMEKYHDPTDEQTA-------------ALYDQS---------FEENELPVEKW 340
            |||..|..|.||..:             .|.|:|         :.|::...:.|
Zfish   314 PYMSDYSFPLDEPVSLHPFHIEDEVDDILLMDESHSHVYNWDRYHESQFSDQDW 367

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
p38bNP_477361.1 STKc_p38 8..353 CDD:143356 130/376 (35%)
S_TKc 24..311 CDD:214567 118/307 (38%)
mapk6NP_001039017.1 STKc_MAPK4_6 14..355 CDD:143359 127/352 (36%)
S_TKc 20..316 CDD:214567 118/307 (38%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG0660
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
21.810

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