DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment p38b and mapk4

DIOPT Version :9

Sequence 1:NP_477361.1 Gene:p38b / 34780 FlyBaseID:FBgn0024846 Length:365 Species:Drosophila melanogaster
Sequence 2:NP_998638.1 Gene:mapk4 / 406782 ZFINID:ZDB-GENE-040426-2835 Length:674 Species:Danio rerio


Alignment Length:339 Identity:128/339 - (37%)
Similarity:193/339 - (56%) Gaps:33/339 - (9%)


- Green bases have known domain annotations that are detailed below.


  Fly    15 RTEWEIPETYQNLQPVGQGAYGQVCKAVVRGTSTKVAIKKLARPFQSAVHAKRTYRELRLLKHMD 79
            |..:::...||:|:|:|.||.|.|..|:.|.:..:||:|||.  .:.||..|...||:::.:.:.
Zfish    10 RYGFDLGAQYQDLRPLGTGASGLVLSALDRRSGLRVAVKKLV--MRDAVSVKHALREVKITRRLQ 72

  Fly    80 HENVIGLLDVF----HPGQPADSLDQFQQVYMVTHLMDADLNNIIRTQKLSDDHVQFLVYQILRG 140
            ||||:.:.||.    || .|.| |.....:|:|...|:.||..::....|..:|...|.||:|||
Zfish    73 HENVVRVYDVLGSSGHP-LPRD-LTHVAAIYIVQECMETDLARLLEQGPLPAEHATLLFYQLLRG 135

  Fly   141 LKYIHSAGVIHRDLKPSNIAVN-EDCELRILDFGLARPAESEMT--GYVA----TRWYRAPEIML 198
            ||:||||.|:||||||:||.:| |...|:|.||||||..:...:  ||::    |:|||:|.::|
Zfish   136 LKFIHSANVLHRDLKPANIFINTEQMLLKIGDFGLARIVDPHYSHKGYLSEGMVTKWYRSPRLLL 200

  Fly   199 NWMHYNQTADIWSVGCIMAELLTGRTLFPGTDHIHQLNLIMEVLGTPADEFMSRISSESARNYIR 263
            :..:|.:..|:|:.|||:||:||||.||.|...:.|:.||::.:..        |..|..:..:|
Zfish   201 SPNNYTKAIDMWAAGCILAEMLTGRMLFAGAHELEQMQLILDTVPV--------IREEDRQELLR 257

  Fly   264 SLPVMP------RRNFRDIFRGANPLAIDLLEKMLELDADKRITAEQALAHPYMEKYHDPTDEQT 322
            .:|.:.      ||:|||:.......|||.||.:|..:...|:|||.||..|::::|..|.||..
Zfish   258 VMPSLVGHGWQIRRSFRDLMPEVEDKAIDFLESILTFNPMDRLTAEAALCQPFLQRYSCPQDEPV 322

  Fly   323 AALYDQSFE-ENEL 335
            :.   |.|. |:||
Zfish   323 SL---QPFRIEDEL 333

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
p38bNP_477361.1 STKc_p38 8..353 CDD:143356 128/339 (38%)
S_TKc 24..311 CDD:214567 118/303 (39%)
mapk4NP_998638.1 STKc_MAPK4_6 13..352 CDD:143359 127/336 (38%)
S_TKc 19..311 CDD:214567 118/303 (39%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG0660
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
21.810

Return to query results.
Submit another query.