DRSC/TRiP Functional Genomics Resources

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Protein Alignment p38b and mapk1

DIOPT Version :9

Sequence 1:NP_477361.1 Gene:p38b / 34780 FlyBaseID:FBgn0024846 Length:365 Species:Drosophila melanogaster
Sequence 2:NP_878308.2 Gene:mapk1 / 360144 ZFINID:ZDB-GENE-030722-2 Length:369 Species:Danio rerio


Alignment Length:343 Identity:164/343 - (47%)
Similarity:235/343 - (68%) Gaps:12/343 - (3%)


- Green bases have known domain annotations that are detailed below.


  Fly    18 WEIPETYQNLQPVGQGAYGQVCKAVVRGTSTKVAIKKLARPFQSAVHAKRTYRELRLLKHMDHEN 82
            :::...|.||..:|.||||.||.|..|....:|||||:: ||:...:.:||.||:::|....|||
Zfish    28 FDVGPRYSNLSYIGGGAYGMVCSAYDRDNKVRVAIKKIS-PFEHQTYCQRTLREIKILLRFKHEN 91

  Fly    83 VIGLLDVFHPGQPADSLDQFQQVYMVTHLMDADLNNIIRTQKLSDDHVQFLVYQILRGLKYIHSA 147
            :||:.|:..    ..::||.:.||:|..||:.||..:::||.||:||:.:.:|||||||||||||
Zfish    92 IIGINDIIR----TPTIDQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYFLYQILRGLKYIHSA 152

  Fly   148 GVIHRDLKPSNIAVNEDCELRILDFGLARPAESE------MTGYVATRWYRAPEIMLNWMHYNQT 206
            .|:||||||||:.:|..|:|:|.||||||.|:.:      :|.|||||||||||||||...|.::
Zfish   153 NVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNSKGYTKS 217

  Fly   207 ADIWSVGCIMAELLTGRTLFPGTDHIHQLNLIMEVLGTPADEFMSRISSESARNYIRSLPVMPRR 271
            .||||||||:||:|:.|.:|||..::.|||.|:.:||:|:.|.::.|.:..||||:.|||:..:.
Zfish   218 IDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSPSQEDLNCIINIKARNYLLSLPLRSKV 282

  Fly   272 NFRDIFRGANPLAIDLLEKMLELDADKRITAEQALAHPYMEKYHDPTDEQTA-ALYDQSFEENEL 335
            .:..:|..|:|.|:|||:|||..:..|||..|:||||||:|:|:|||||..| |.:....|.::|
Zfish   283 PWNRLFPNADPKALDLLDKMLTFNPHKRIEVEEALAHPYLEQYYDPTDEPVAEAPFKFDMELDDL 347

  Fly   336 PVEKWREMVFSEVTAFKP 353
            |.|..:|::|.|...|:|
Zfish   348 PKETLKELIFEETARFQP 365

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
p38bNP_477361.1 STKc_p38 8..353 CDD:143356 163/341 (48%)
S_TKc 24..311 CDD:214567 145/292 (50%)
mapk1NP_878308.2 STKc_ERK1_2_like 28..362 CDD:270839 162/338 (48%)
S_TKc 34..322 CDD:214567 145/292 (50%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG0660
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
32.810

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