DRSC/TRiP Functional Genomics Resources

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Protein Alignment p38b and rl

DIOPT Version :9

Sequence 1:NP_477361.1 Gene:p38b / 34780 FlyBaseID:FBgn0024846 Length:365 Species:Drosophila melanogaster
Sequence 2:NP_001015122.1 Gene:rl / 3354888 FlyBaseID:FBgn0003256 Length:376 Species:Drosophila melanogaster


Alignment Length:342 Identity:161/342 - (47%)
Similarity:231/342 - (67%) Gaps:12/342 - (3%)


- Green bases have known domain annotations that are detailed below.


  Fly    18 WEIPETYQNLQPVGQGAYGQVCKAVVRGTSTKVAIKKLARPFQSAVHAKRTYRELRLLKHMDHEN 82
            :|:...|..|..:|:||||.|..|....|:.:|||||:: ||:...:.:||.||:.:|....|||
  Fly    32 FEVGPRYIKLAYIGEGAYGMVVSADDTLTNQRVAIKKIS-PFEHQTYCQRTLREITILTRFKHEN 95

  Fly    83 VIGLLDVFHPGQPADSLDQFQQVYMVTHLMDADLNNIIRTQKLSDDHVQFLVYQILRGLKYIHSA 147
            :|.:.|:..    .||:||.:.||:|..||:.||..:::||:||:||:.:.:|||||||||||||
  Fly    96 IIDIRDILR----VDSIDQMRDVYIVQCLMETDLYKLLKTQRLSNDHICYFLYQILRGLKYIHSA 156

  Fly   148 GVIHRDLKPSNIAVNEDCELRILDFGLARPAESE------MTGYVATRWYRAPEIMLNWMHYNQT 206
            .|:||||||||:.:|:.|:|:|.||||||.|:.|      :|.|||||||||||||||...|.::
  Fly   157 NVLHRDLKPSNLLLNKTCDLKICDFGLARIADPEHDHTGFLTEYVATRWYRAPEIMLNSKGYTKS 221

  Fly   207 ADIWSVGCIMAELLTGRTLFPGTDHIHQLNLIMEVLGTPADEFMSRISSESARNYIRSLPVMPRR 271
            .||||||||:||:|:.|.:|||..::.|||.|:.|||:|:.:.:..|.:|.||||:.|||..|..
  Fly   222 IDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGVLGSPSRDDLECIINEKARNYLESLPFKPNV 286

  Fly   272 NFRDIFRGANPLAIDLLEKMLELDADKRITAEQALAHPYMEKYHDPTDEQTAAL-YDQSFEENEL 335
            .:..:|..|:.||:|||.|||..:..|||..|:||||||:|:|:||.||..|.: :..:.|.:::
  Fly   287 PWAKLFPNADALALDLLGKMLTFNPHKRIPVEEALAHPYLEQYYDPGDEPVAEVPFRINMENDDI 351

  Fly   336 PVEKWREMVFSEVTAFK 352
            ..:..:.::|.|...||
  Fly   352 SRDALKSLIFEETLKFK 368

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
p38bNP_477361.1 STKc_p38 8..353 CDD:143356 161/342 (47%)
S_TKc 24..311 CDD:214567 147/292 (50%)
rlNP_001015122.1 STKc_ERK1_2_like 32..366 CDD:270839 159/338 (47%)
S_TKc 38..326 CDD:214567 147/292 (50%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C45442166
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG0660
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D34458at7147
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 1 1.000 - - otm2432
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - P PTHR24055
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
65.850

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