DRSC/TRiP Functional Genomics Resources

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Protein Alignment p38b and pmk-1

DIOPT Version :9

Sequence 1:NP_477361.1 Gene:p38b / 34780 FlyBaseID:FBgn0024846 Length:365 Species:Drosophila melanogaster
Sequence 2:NP_501365.1 Gene:pmk-1 / 191743 WormBaseID:WBGene00004055 Length:377 Species:Caenorhabditis elegans


Alignment Length:352 Identity:215/352 - (61%)
Similarity:274/352 - (77%) Gaps:3/352 - (0%)


- Green bases have known domain annotations that are detailed below.


  Fly     8 FYKLDINRTEWEIPETYQNLQPVGQGAYGQVCKAVVRGTSTKVAIKKLARPFQSAVHAKRTYREL 72
            :|.:::||:.|.:|..|.||.|:|.||||.||.|....:.|:|||||..|||||.:||:||||||
 Worm    19 YYVVELNRSVWVVPNYYINLTPIGTGAYGTVCAAECTRSGTRVAIKKFNRPFQSIIHARRTYREL 83

  Fly    73 RLLKHMDHENVIGLLDVFHPGQPADSLDQFQQVYMVTHLMDADLNNIIRTQKLSDDHVQFLVYQI 137
            |||:.|.|||:|.|||||.|.   ::::..:.||.|:.||.|||:||::.|:|:|||:|||||||
 Worm    84 RLLRCMCHENIIDLLDVFTPN---ENVNDIEDVYFVSMLMGADLSNILKIQRLNDDHIQFLVYQI 145

  Fly   138 LRGLKYIHSAGVIHRDLKPSNIAVNEDCELRILDFGLARPAESEMTGYVATRWYRAPEIMLNWMH 202
            ||||||||||.:||||||||||||||||||:||||||||..:|||||||||||||||||||||||
 Worm   146 LRGLKYIHSADIIHRDLKPSNIAVNEDCELKILDFGLARQTDSEMTGYVATRWYRAPEIMLNWMH 210

  Fly   203 YNQTADIWSVGCIMAELLTGRTLFPGTDHIHQLNLIMEVLGTPADEFMSRISSESARNYIRSLPV 267
            |.||.|:||||||:|||:||:|||||:|||.||..||.|.|||.:||:.:||||.||||||:||.
 Worm   211 YTQTVDVWSVGCILAELITGKTLFPGSDHIDQLTRIMSVTGTPDEEFLKKISSEEARNYIRNLPK 275

  Fly   268 MPRRNFRDIFRGANPLAIDLLEKMLELDADKRITAEQALAHPYMEKYHDPTDEQTAALYDQSFEE 332
            |.||:|:.:|..|.|.|||||||||.||.|:|.||::|:.|.|:..|||.|||..|...|.:.:.
 Worm   276 MTRRDFKRLFAQATPQAIDLLEKMLHLDPDRRPTAKEAMEHEYLAAYHDETDEPIAEEMDLNDDV 340

  Fly   333 NELPVEKWREMVFSEVTAFKPTAAFAE 359
            ....:::|:::::.|::.|:...|||:
 Worm   341 RADTIDEWKKIIWEEISDFQKNVAFAD 367

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
p38bNP_477361.1 STKc_p38 8..353 CDD:143356 212/344 (62%)
S_TKc 24..311 CDD:214567 195/286 (68%)
pmk-1NP_501365.1 STKc_p38 19..361 CDD:143356 212/344 (62%)
S_TKc 35..319 CDD:214567 195/286 (68%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C160157471
Domainoid 1 1.000 404 1.000 Domainoid score I365
eggNOG 1 0.900 - - E1_KOG0660
Hieranoid 1 1.000 - -
Homologene 1 1.000 - - H31777
Inparanoid 1 1.050 453 1.000 Inparanoid score I897
Isobase 1 0.950 - 0 Normalized mean entropy S378
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D324618at33208
OrthoFinder 1 1.000 - - FOG0000533
OrthoInspector 1 1.000 - - otm14777
orthoMCL 1 0.900 - - OOG6_102675
Panther 1 1.100 - - LDO PTHR24055
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R566
SonicParanoid 1 1.000 - - X352
SwiftOrtho 1 1.000 - -
TreeFam 1 0.960 - -
1716.740

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