DRSC/TRiP Functional Genomics Resources

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Protein Alignment p38b and kgb-1

DIOPT Version :9

Sequence 1:NP_477361.1 Gene:p38b / 34780 FlyBaseID:FBgn0024846 Length:365 Species:Drosophila melanogaster
Sequence 2:NP_499922.1 Gene:kgb-1 / 176866 WormBaseID:WBGene00002187 Length:390 Species:Caenorhabditis elegans


Alignment Length:377 Identity:149/377 - (39%)
Similarity:216/377 - (57%) Gaps:38/377 - (10%)


- Green bases have known domain annotations that are detailed below.


  Fly     6 AKFYKLDIN------RTEWEIPETYQNLQPVGQGAYGQVCKAVVRGTSTKVAIKKLARPFQSAVH 64
            ::|:::.|.      .:.:.||..|.||..:..||.|.|..|....|:.:|||||:.:||...:.
 Worm    14 SRFHQVTIRDPIAGADSTFTIPTRYVNLSFLNAGAQGTVVMADDLVTTQRVAIKKMQQPFVMTMS 78

  Fly    65 AKRTYRELRLLKHMDHENVIGLLDVFHPGQPADSLDQFQQVYMVTHLMDADLNNIIRTQKLSDDH 129
            |||.|||..||..:.|.|:|.||:.|   .|..||..|::||:|..||..:|:.:|...:|....
 Worm    79 AKRAYREFILLTTIKHPNIIRLLNAF---TPDTSLSTFREVYLVMELMTHNLHEVIHRLRLDHKT 140

  Fly   130 VQFLVYQILRGLKYIHSAGVIHRDLKPSNIAVNEDCELRILDFGLAR----PAESEMTGYVATRW 190
            :.|.|||.|..:|::|::||||||||||||.||:.|.|::|||||||    .....|:.||.||:
 Worm   141 LSFFVYQSLCAIKHLHNSGVIHRDLKPSNIVVNDRCVLKVLDFGLARKKNVDTSMRMSDYVVTRY 205

  Fly   191 YRAPEIMLNWMHYNQTADIWSVGCIMAELLTGRTLFPGTDHIHQLNLIMEVLGTPADEFMSRISS 255
            |||||::|. :.|::..||||||||.||::....||||.|.|.|...|..|||||.|.|:|:: .
 Worm   206 YRAPEVILG-LPYSEKVDIWSVGCIFAEMINHTVLFPGKDRIDQWTKIYSVLGTPDDHFISQL-G 268

  Fly   256 ESARNYIRSLPVMPRRNFRDIFRGANPL--------------AIDLLEKMLELDADKRITAEQAL 306
            :||..|:||||....|.|.:|....|.|              |.|||..||:::.::|.:.|.||
 Worm   269 QSAAMYVRSLPRHQARAFSEIVPDTNFLPETENPRVHLTPHVARDLLFNMLKINPEERYSVEDAL 333

  Fly   307 AHPYM------EKYHDPTDEQTAALYDQSFEENELPVEKWREMVFSEVTAFK 352
            .|||:      ::.:.|..|..   |||..:..:..:.:|:|::|:||..::
 Worm   334 NHPYVKLWFKDDEVNAPASENR---YDQEIDFADKTLIEWKELIFNEVQRYQ 382

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
p38bNP_477361.1 STKc_p38 8..353 CDD:143356 149/375 (40%)
S_TKc 24..311 CDD:214567 134/304 (44%)
kgb-1NP_499922.1 PKc_like 37..378 CDD:304357 143/348 (41%)
S_TKc 38..338 CDD:214567 134/304 (44%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C160157470
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
32.840

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