DRSC/TRiP Functional Genomics Resources

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Protein Alignment p38b and Mapk1

DIOPT Version :9

Sequence 1:NP_477361.1 Gene:p38b / 34780 FlyBaseID:FBgn0024846 Length:365 Species:Drosophila melanogaster
Sequence 2:NP_446294.1 Gene:Mapk1 / 116590 RGDID:70500 Length:358 Species:Rattus norvegicus


Alignment Length:343 Identity:163/343 - (47%)
Similarity:235/343 - (68%) Gaps:12/343 - (3%)


- Green bases have known domain annotations that are detailed below.


  Fly    18 WEIPETYQNLQPVGQGAYGQVCKAVVRGTSTKVAIKKLARPFQSAVHAKRTYRELRLLKHMDHEN 82
            :::...|.||..:|:||||.||.|.......:|||||:: ||:...:.:||.||:::|....|||
  Rat    17 FDVGPRYTNLSYIGEGAYGMVCSAYDNLNKVRVAIKKIS-PFEHQTYCQRTLREIKILLRFRHEN 80

  Fly    83 VIGLLDVFHPGQPADSLDQFQQVYMVTHLMDADLNNIIRTQKLSDDHVQFLVYQILRGLKYIHSA 147
            :||:.|:..    |.:::|.:.||:|..||:.||..:::||.||:||:.:.:|||||||||||||
  Rat    81 IIGINDIIR----APTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYFLYQILRGLKYIHSA 141

  Fly   148 GVIHRDLKPSNIAVNEDCELRILDFGLARPAESE------MTGYVATRWYRAPEIMLNWMHYNQT 206
            .|:||||||||:.:|..|:|:|.||||||.|:.:      :|.|||||||||||||||...|.::
  Rat   142 NVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNSKGYTKS 206

  Fly   207 ADIWSVGCIMAELLTGRTLFPGTDHIHQLNLIMEVLGTPADEFMSRISSESARNYIRSLPVMPRR 271
            .||||||||:||:|:.|.:|||..::.|||.|:.:||:|:.|.::.|.:..||||:.|||...:.
  Rat   207 IDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSPSQEDLNCIINLKARNYLLSLPHKNKV 271

  Fly   272 NFRDIFRGANPLAIDLLEKMLELDADKRITAEQALAHPYMEKYHDPTDEQTA-ALYDQSFEENEL 335
            .:..:|..|:..|:|||:|||..:..|||..||||||||:|:|:||:||..| |.:....|.::|
  Rat   272 PWNRLFPNADSKALDLLDKMLTFNPHKRIEVEQALAHPYLEQYYDPSDEPIAEAPFKFDMELDDL 336

  Fly   336 PVEKWREMVFSEVTAFKP 353
            |.||.:|::|.|...|:|
  Rat   337 PKEKLKELIFEETARFQP 354

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
p38bNP_477361.1 STKc_p38 8..353 CDD:143356 162/341 (48%)
S_TKc 24..311 CDD:214567 144/292 (49%)
Mapk1NP_446294.1 STKc_ERK1_2_like 17..351 CDD:270839 161/338 (48%)
Inhibitor-binding 103..109 2/5 (40%)
TXY 183..185 1/1 (100%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG0660
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
32.810

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