DRSC/TRiP Functional Genomics Resources

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Protein Alignment TM9SF4 and TMN3

DIOPT Version :9

Sequence 1:NP_001285907.1 Gene:TM9SF4 / 34778 FlyBaseID:FBgn0028541 Length:630 Species:Drosophila melanogaster
Sequence 2:NP_011038.3 Gene:TMN3 / 856849 SGDID:S000000915 Length:706 Species:Saccharomyces cerevisiae


Alignment Length:747 Identity:190/747 - (25%)
Similarity:321/747 - (42%) Gaps:180/747 - (24%)


- Green bases have known domain annotations that are detailed below.


  Fly     8 RPCLAIVLLAGVVLV----ADSFYVP-----GVAPVEFVQDQK-----------------IDVKA 46
            ||..:::.|..:|:|    .:.||..     |..|| ....||                 :::..
Yeast     4 RPKRSVITLMAIVVVMLILRNQFYSSRTRGHGQEPV-ISSSQKNLYDGWITPNFYRKGDPLELIV 67

  Fly    47 VKMTSSRTQLPYQYYSLRFCYPKNGTLIFKSE---NLGEVLRGDRIVNTPYEVRMNQQVNCRLLC 108
            .|:.|..|||||.||.|.|..|..   :.|..   :|.|::||||...:.|:::..:...|..||
Yeast    68 NKVESDLTQLPYAYYDLPFTCPPT---MHKKPLHLSLNEIIRGDRKWESDYKLKFGEDNPCETLC 129

  Fly   109 NQKDRPLTWSKEDSALVAERIQHEYFVHLLVDN-LPVATRIVSVNNPAEVTYEHGYRLGQV--DG 170
            .:|.     :||....:.:.::..|.|..|:|: ||.||..:|..:..:. |..|:.||.:  |.
Yeast   130 ARKT-----TKEGMQTLDKLVREGYVVQWLIDDELPAATTFISTTDHKKY-YASGFPLGFIDPDT 188

  Fly   171 DNIYINNHLKFILSYHMHSKDKYRVVGFEVETVSVSHKELKFH--GDTCNFPDSARPQLVNPNGE 233
            |..|::||:..::.:|....||..:|||||...|||    .:|  |.:.|:   .:.::|.|..|
Yeast   189 DKTYLHNHVMLVIRFHASDNDKNTIVGFEVYPRSVS----DYHCPGASKNY---EQYEIVIPEDE 246

  Fly   234 ---TQLYFTYSVEWKES-KVSWASRWDIYLGM------RDVQIHWFSIINSLVVVFFLSGILTMI 288
               |.|.|||||.|:|. :|.|..|||.:|..      :.:|.||.|:.||:.:|..:|.|..:|
Yeast   247 NELTYLPFTYSVYWREEFEVDWNHRWDYFLNAGELSDEQSIQFHWMSLANSVGIVLSISFITLII 311

  Fly   289 MIRTLRRD------------IARYNTDDNIEDTLEETG----------WKLVHGDVFRPPKNTRL 331
            .:|.:..|            |....|:|:::|  ::.|          | :.:|   ||    .|
Yeast   312 YVRVMYTDKSNSKSPKYMINIEGIETEDDLDD--DKYGKYSVYTVAKDW-IQNG---RP----NL 366

  Fly   332 FSAIIGSGIQIFFMAL---ITIFFAMLGMLSPSS--------RGALMTSGIFMYVFMGTIAGYYA 385
            |      |:::..:.:   :...|.::|.|:.|.        |.:::|..|..:|....:|.:..
Yeast   367 F------GLKVLILLVSFGVQFLFTIIGSLTISCSMNKLHNVRNSVLTMAILFFVLGAFMASFVG 425

  Fly   386 ARLYKTMKGREWKRAAFLTATLY-------------------PGIVFGTGFFLNFFIWDKSSSGA 431
            .||....|.:..| |.:|....|                   ||||..:.|.||..:|...|:.|
Yeast   426 TRLSMVTKTKRTK-ANYLDDNRYLKDYKKFSPIFTILCGSSLPGIVMVSTFLLNSIVWAHDSTSA 489

  Fly   432 VPFTTMISLLLLWFGISVPLVYLGFYLGYRKQPYQHPVRTNMIPRQVPTQHWYMNAV-------- 488
            :||.|::..:.::|.:.:||...|                .::...:|...::::.:        
Yeast   490 LPFKTIVFFMSIYFIVCIPLSLFG----------------GIVANNIPLPQYWLSGITKDESNSD 538

  Fly   489 ------------------LSTLMAGILPFGAVFIELFFVFTAIW--QNQFYYLFGFLFLVFCILV 533
                              ....:.||.|...:::|:.:|:.::|  :..|||.:|||||...:|.
Yeast   539 GNGLFVPKSRAKFNPLVYCGIYLCGIFPLLVIYVEMQYVYKSLWLEKTTFYYFYGFLFLSIILLC 603

  Fly   534 VSCAQISIVMTY--FQLCGED----YRWWWRSFVVSGGSAVYVLFYSIFYFFTKLEITEFIPTLL 592
            |...:|||:.:|  .:.|.||    ..|.|:.|.:.....||:..||::|.|..|.|..|...|:
Yeast   604 VLTMEISIIGSYLLMRFCFEDKVVRNNWRWKCFEMGFSGGVYMELYSLYYIFAVLNIHGFSSILI 668

  Fly   593 YLGYTGLMVLTFWLLTGSIGFFAAYVFILRIY 624
            .:.|:.:..:...|..|::.:..|..||.:||
Yeast   669 SICYSLIFNVMCSLGLGALSYLTASWFINKIY 700

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
TM9SF4NP_001285907.1 EMP70 57..587 CDD:281048 163/633 (26%)
TMN3NP_011038.3 EMP70 78..663 CDD:397233 163/633 (26%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG1278
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 1 1.010 - - QHG53553
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR10766
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
43.920

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