DRSC/TRiP Functional Genomics Resources

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Protein Alignment TM9SF4 and TMN2

DIOPT Version :9

Sequence 1:NP_001285907.1 Gene:TM9SF4 / 34778 FlyBaseID:FBgn0028541 Length:630 Species:Drosophila melanogaster
Sequence 2:NP_010392.1 Gene:TMN2 / 851685 SGDID:S000002514 Length:672 Species:Saccharomyces cerevisiae


Alignment Length:671 Identity:223/671 - (33%)
Similarity:364/671 - (54%) Gaps:83/671 - (12%)


- Green bases have known domain annotations that are detailed below.


  Fly    26 FYVPGVAPVEFVQDQKIDVKAVKMTSS------------------RTQLPYQYYSLR--FCYPKN 70
            |.:||::|..:....:|.:...::|.|                  .....|.||:.|  ||.|::
Yeast    19 FSLPGLSPTTYHSGDEIPLLVNRLTPSIYFQHQDEEGNDVSGDKEHFLYSYDYYNKRFHFCRPEH 83

  Fly    71 GTLIFKSENLGEVLRGDRIVNTPYEVRMNQQVNCRLLCNQKDRPLTWSKEDSALVAERIQHEYFV 135
              :..:.|:||.|:.||||.|:|:::.|.::..|..||..     |...:|:..:...|:..:|.
Yeast    84 --VEKQPESLGSVIFGDRIYNSPFQLNMLEEKECVALCKS-----TIPGKDAKFINTLIKSGFFQ 141

  Fly   136 HLLVDNLPVATRIVSVNNPAEVTYEHGYRLG------QVDGDNI--------------------- 173
            :.|||.||.|.:.......... |..|:.||      .|||..:                     
Yeast   142 NWLVDGLPAARKAYDSRTKTNY-YGTGFELGFTDVKQTVDGKAVPSTMEELTSEASNEDVILDAR 205

  Fly   174 ----------------YINNHLKFILSYHMHSKDKYRVVGFEVETVSVSHKELKFHGDTCNFPDS 222
                            |..||....:.:|....|.|||||..|..||:....    ...|:  .:
Yeast   206 LPKNVKPNLVKTVELPYFVNHFDIEVEFHDRGNDNYRVVGVIVNPVSIERSS----PGACS--TT 264

  Fly   223 ARPQLVNPNGETQLYFTYSVEWKESKVSWASRWDIYLGMRDVQIHWFSIINSLVVVFFLSGILTM 287
            .:|.:::.:.:.::||||||::..|...||:|||.||.:.|.||.|||:||..|:|..||.::..
Yeast   265 GKPLILDEDKDNEVYFTYSVKFVASDTVWATRWDKYLHIYDPQIQWFSLINFSVIVILLSSVVMH 329

  Fly   288 IMIRTLRRDIARYNTDDNIEDTL-EETGWKLVHGDVFRPPKNTRLFSAIIGSGIQIFFMALITIF 351
            .::|.|:.|:|||| :.|:::.. |::||||.||||||.|..:.|.|.::|||:|:|.|.:.:||
Yeast   330 SLLRALKSDLARYN-ELNLDNEFHEDSGWKLGHGDVFRTPSKSMLLSILVGSGMQLFLMVMCSIF 393

  Fly   352 FAMLGMLSPSSRGALMTSGIFMYVFMGTIAGYYAARLYKTMKGREWKRAAFLTATLYPGIVFGTG 416
            ||.:|::||.|||:|.|....:|...|.:..|.:..:||..:|..||....||..|.||.:|...
Yeast   394 FAAVGLVSPVSRGSLPTVMFVLYALFGFVGSYASMGVYKFFRGPYWKANMILTPILLPGAIFLLI 458

  Fly   417 FFLNFFIWDKSSSGAVPFTTMISLLLLWFGISVPLVYLGFYLGYRKQPY-QHPVRTNMIPRQVPT 480
            ..:|||:....|||.:|..::..::||||.:||||.:.|..:.:::..: :||.:||.|.||:|.
Yeast   459 VIMNFFLLFAHSSGVIPARSLFFIILLWFLVSVPLSFAGSIVAHKQCNWDEHPTKTNQIARQIPY 523

  Fly   481 QHWYMNAVLSTLMAGILPFGAVFIELFFVFTAIWQNQFYYLFGFLFLVFCILVVSCAQISIVMTY 545
            |.||:....:||:|||..||::.:||:|:::::|.|:.:|:||||...|.:|.::.:.::|::||
Yeast   524 QPWYLRTAQATLIAGIFSFGSIAVELYFIYSSLWFNKIFYMFGFLLFSFLLLTLTTSLVTILITY 588

  Fly   546 FQLCGEDYRWWWRSFVVSG-GSAVYVLFYSIFYFFTKLEITEFIPTLLYLGYTGLMVLTFWLLTG 609
            :.||.|::.|.||||::.| |.::|...:||  .|||.::...|..:|||||:.::.....::||
Yeast   589 YSLCLENWLWQWRSFIIGGLGCSIYTFIHSI--LFTKFKLGGVITVVLYLGYSLIISALCCVVTG 651

  Fly   610 SIGFFAAYVFILRIYGAVKID 630
            :||||::..||.:||.|:|::
Yeast   652 AIGFFSSMFFIRKIYSAIKVE 672

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
TM9SF4NP_001285907.1 EMP70 57..587 CDD:281048 198/577 (34%)
TMN2NP_010392.1 EMP70 68..629 CDD:397233 198/577 (34%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 1 1.000 380 1.000 Domainoid score I105
eggNOG 1 0.900 - - E1_KOG1278
Hieranoid 1 1.000 - -
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 429 1.000 Inparanoid score I278
Isobase 00.000 Not matched by this tool.
OMA 1 1.010 - - QHG53553
OrthoFinder 1 1.000 - - FOG0000597
OrthoInspector 1 1.000 - - mtm9200
orthoMCL 1 0.900 - - OOG6_100462
Panther 1 1.100 - - O PTHR10766
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R1983
SonicParanoid 1 1.000 - - X358
TreeFam 00.000 Not matched by this tool.
1211.900

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