DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment TM9SF4 and AT1G08350

DIOPT Version :9

Sequence 1:NP_001285907.1 Gene:TM9SF4 / 34778 FlyBaseID:FBgn0028541 Length:630 Species:Drosophila melanogaster
Sequence 2:NP_001077489.1 Gene:AT1G08350 / 837355 AraportID:AT1G08350 Length:589 Species:Arabidopsis thaliana


Alignment Length:593 Identity:185/593 - (31%)
Similarity:304/593 - (51%) Gaps:75/593 - (12%)


- Green bases have known domain annotations that are detailed below.


  Fly    58 YQYYSLRFCYPKNGTLIFKSENLGEVLRGDRIVNTPYEVRMNQQVNCRLLCNQKDRPLTWSKEDS 122
            ||||.|.||  :.|.:|.|.|.|||||.|||::::.|:::..:.....:||.::   ||.|  |.
plant    52 YQYYDLPFC--RRGPVIEKQETLGEVLNGDRLMSSLYKLKFREDKTHFVLCRKR---LTSS--DI 109

  Fly   123 ALVAERIQHEYFVHLLVDNLPVATRIVSVNNPAEVTYEHGYRLGQVDGD---------NIYINNH 178
            |...:.|..:|:..:..|:||:                .|: :|:|:||         ..||.:|
plant   110 ARFRDIIAQDYYFQMYYDDLPL----------------WGF-VGKVEGDYFGQGEKHTKYYIFSH 157

  Fly   179 LKFILSYHMHSKDKYRVVGFEVETVSVSHKELKFHGDTCNFPDSARPQLVNPNGETQLYFTYSVE 243
            |||.:.|   :.||         .:.::           :|.|.:....::.|.|..:.|||||.
plant   158 LKFNVLY---NADK---------VIEIN-----------SFSDPSYMVDISENTEIDVQFTYSVS 199

  Fly   244 W---------KESKVSWASRWDIYLGMRDVQIHWFSIINSLVVVFFLSGILTMIMIRTLRRDIAR 299
            |         :.:|.|.||...|     ..:||:||.:||:.||..|.|:::.:.:|.|:.::..
plant   200 WNLTSERSETRMNKYSRASFHPI-----SQKIHFFSFLNSITVVVLLIGLISFLFMRHLKNELRS 259

  Fly   300 YNTDDNIEDTLEETGWKLVHGDVFRPPKNTRLFSAIIGSGIQIFFMALITIFFAMLGMLSPSSRG 364
            |:..|  |:..:|.||||||.||||.|:|.....||:|:|.|:..:.:.....|..|.|.|.:||
plant   260 YSIGD--EEERKEAGWKLVHSDVFRCPRNISWLCAILGTGTQLLILIIALFALAFTGFLYPYNRG 322

  Fly   365 ALMTSGIFMYVFMGTIAGYYAARLYKTMKGREWKRAAFLTATLYPGIVFGTGFFLNFFIWDKSSS 429
            .|:||.:.||.....:|||.:...:...:|.:.||:..|...|||...|.....||.......::
plant   323 MLLTSLVIMYTLTSIVAGYTSTSFHSQFEGNKQKRSVRLAGILYPVPFFIILSVLNTVAITYGAT 387

  Fly   430 GAVPFTTMISLLLLWFGISVPLVYLGFYLGYR--KQPYQHPVRTNMIPRQVPTQHWYMNAVLSTL 492
            .|:||.|::.::|::..:::|.:.||..||.|  ...:|.|......||::|.|:||...:....
plant   388 AALPFGTIVIIILIFTLLNIPFLMLGGVLGNRFGLLEFQPPSAVKRNPREIPPQNWYRRKLYQVF 452

  Fly   493 MAGILPFGAVFIELFFVFTAIWQNQFYYLFGFLFLVFCILVVSCAQISIVMTYFQLCGEDYRWWW 557
            :.|.:||.||.:|...::.::|..:.|...|.:...|.:|:...:.:.|::||.||.|||:.|||
plant   453 LGGFVPFSAVVLEWHQLYASLWGFKIYTSPGIMLFTFIVLIFLSSSVGIILTYIQLSGEDHEWWW 517

  Fly   558 RSFVVSGGSAVYVLFYSIFYFFTKLEITEFIPTLLYLGYTGLMVLTFWLLTGSIGFFAAYVFILR 622
            ||.:..|.:||::..|.:. |:.:.::|.|:....|||||.|:....:|:.|:|.|.|:.:||..
plant   518 RSILCGGFTAVFMYGYGVL-FYLRSDMTGFLQLSFYLGYTALLCYALFLVLGTISFLASLMFIRH 581

  Fly   623 IYGAVKID 630
            ||.:||::
plant   582 IYRSVKLE 589

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
TM9SF4NP_001285907.1 EMP70 57..587 CDD:281048 167/548 (30%)
AT1G08350NP_001077489.1 EMP70 52..546 CDD:367285 167/548 (30%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG1278
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 1 1.010 - - QHG53553
OrthoDB 1 1.010 - - D641127at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
43.830

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