DRSC/TRiP Functional Genomics Resources

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Protein Alignment TM9SF4 and tm9sf2

DIOPT Version :9

Sequence 1:NP_001285907.1 Gene:TM9SF4 / 34778 FlyBaseID:FBgn0028541 Length:630 Species:Drosophila melanogaster
Sequence 2:XP_002935695.2 Gene:tm9sf2 / 447968 XenbaseID:XB-GENE-953107 Length:700 Species:Xenopus tropicalis


Alignment Length:676 Identity:293/676 - (43%)
Similarity:406/676 - (60%) Gaps:73/676 - (10%)


- Green bases have known domain annotations that are detailed below.


  Fly     4 GALARPCLAI--VLLAGVVLVADSFYVPGVAPVEFVQDQK--------IDVKAVKMTSSRTQLPY 58
            |...:|...:  :||..|:....:||:||:|||.|.:..|        |::...::.|..:.|||
 Frog    49 GMATQPSTVMFSLLLLAVIGPCAAFYLPGLAPVSFCEQGKETAECKSEIELFVNRLDSVESVLPY 113

  Fly    59 QYYSLRFCYPKNGTLIFKSENLGEVLRGDRIVNTPYEVRMNQQVNCRLLC-------NQKDR-PL 115
            :|.:..||  :|......|||||:||.|:||..:||:...|::|.|:|:|       ||:.: .|
 Frog   114 EYAAFDFC--QNTGEKRPSENLGQVLFGERIEPSPYKFIFNKEVKCQLVCKKTYSSSNQESKSKL 176

  Fly   116 TWSKEDSALVAERIQHEYFVHLLVDNLPVATRIVSVN------NPAEVTYEHGYRLGQV------ 168
            .:.|:...|   ..||    |.:|||:|| |....|.      ||       |:.:|..      
 Frog   177 DFLKKSMLL---NYQH----HWIVDNMPV-TWCYDVEDGQRFCNP-------GFPIGCYITQNGH 226

  Fly   169 ------------DGDNIYINNHLKFILSYHMHSKDKY--RVVGFEVETVSVSHKELKFHGDTCNF 219
                        :.|..||.||:...:.||:...:..  |:|..::|..|..    :.|.|.   
 Frog   227 PKDACVINSEFHEKDAYYIFNHVDIKMFYHVVENEGQGARLVAAKLEPKSFK----QTHVDQ--- 284

  Fly   220 PDSARPQLVNPN---GETQLYFTYSVEWKESK-VSWASRWDIYL-GMRDVQIHWFSIINSLVVVF 279
            ||.:.|.:...|   |:..:.:||||.:.|.| :.||||||..| .|....|.||||:||||:|.
 Frog   285 PDCSGPPMEIKNAFGGDVTVPYTYSVTFHEEKTIRWASRWDYILESMPHTHIQWFSIMNSLVIVL 349

  Fly   280 FLSGILTMIMIRTLRRDIARYNTDDNIEDTLEETGWKLVHGDVFRPPKNTRLFSAIIGSGIQIFF 344
            ||||::.|||:|||.:||||||..|:.||..||.||||||||:||.|:...|.|..:|||.||..
 Frog   350 FLSGMVAMIMLRTLHKDIARYNQMDSTEDAQEEFGWKLVHGDIFRAPRKGMLLSVFLGSGTQILI 414

  Fly   345 MALITIFFAMLGMLSPSSRGALMTSGIFMYVFMGTIAGYYAARLYKTMKGREWKRAAFLTATLYP 409
            |..:|:|||.||.|||::||||||..:.::|.:||.|||.|:|.||:..|.:||....|||.|.|
 Frog   415 MTFVTLFFACLGFLSPANRGALMTCAVVLWVLLGTPAGYVASRFYKSFGGEKWKTNVLLTAFLCP 479

  Fly   410 GIVFGTGFFLNFFIWDKSSSGAVPFTTMISLLLLWFGISVPLVYLGFYLGYRKQPYQHPVRTNMI 474
            ||||...|.:|..:|.:.||.|:||.|::::|.|||.|||||.::|.|.|::|...:||||||.|
 Frog   480 GIVFADFFLMNLILWGEGSSAAIPFGTLVAILALWFCISVPLTFVGAYFGFKKHAIEHPVRTNQI 544

  Fly   475 PRQVPTQHWYMNAVLSTLMAGILPFGAVFIELFFVFTAIWQNQFYYLFGFLFLVFCILVVSCAQI 539
            |||:|.|.:|...:...:|.||||||.:||:|||:..:||.:|.||:||||||||.|||::|::.
 Frog   545 PRQIPEQSFYTKPLPGIVMGGILPFGCIFIQLFFILNSIWSHQMYYMFGFLFLVFIILVITCSEA 609

  Fly   540 SIVMTYFQLCGEDYRWWWRSFVVSGGSAVYVLFYSIFYFFTKLEITEFIPTLLYLGYTGLMVLTF 604
            :|::.||.||.|||.|.||||:.||.:|||.|.|::.|||:||:||....|:||.|||.:|||.|
 Frog   610 TILLCYFHLCAEDYHWQWRSFLTSGFTAVYFLVYAVHYFFSKLQITGTASTILYFGYTMIMVLIF 674

  Fly   605 WLLTGSIGFFAAYVFILRIYGAVKID 630
            :|.||:|||||.:.|:.:||..||:|
 Frog   675 FLFTGTIGFFACFWFVTKIYSVVKVD 700

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
TM9SF4NP_001285907.1 EMP70 57..587 CDD:281048 252/568 (44%)
tm9sf2XP_002935695.2 EMP70 112..656 CDD:367285 251/567 (44%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D135708at33208
OrthoFinder 1 1.000 - - FOG0000597
OrthoInspector 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R1983
SonicParanoid 1 1.000 - - X358
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
44.040

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