DRSC/TRiP Functional Genomics Resources

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Protein Alignment TM9SF4 and Tm9sf3

DIOPT Version :10

Sequence 1:NP_609669.1 Gene:TM9SF4 / 34778 FlyBaseID:FBgn0028541 Length:630 Species:Drosophila melanogaster
Sequence 2:NP_001414741.1 Gene:Tm9sf3 / 309475 RGDID:1564625 Length:587 Species:Rattus norvegicus


Alignment Length:589 Identity:204/589 - (34%)
Similarity:315/589 - (53%) Gaps:67/589 - (11%)


- Green bases have known domain annotations that are detailed below.


  Fly    55 QLPYQYYSLRFCYPKNGTLIFKSENLGEVLRGDRIVNTPYEVRMNQQVNCRLLCNQKDRPLTWSK 119
            |..|:|:||.||.....::....|.|||.|:|..:..:..:::....|.....|   :..|...|
  Rat    53 QETYKYFSLPFCVGSKKSISHYHETLGEALQGVELEFSGLDIKFKDDVMPGTYC---EIDLDKEK 114

  Fly   120 EDSALVAERIQHEYFVHLLVDNLPVATRIVSVNNPAEVTYEHGYRLGQVD--GDNIYINNHLKFI 182
            .|:.:.|  |::.|:..:.:|:||:...:                 |:.|  |::.|:..:.|. 
  Rat   115 RDAFVYA--IKNHYWYQMYIDDLPIWGIV-----------------GEADENGEDYYLWTYKKL- 159

  Fly   183 LSYHMHSKDKYRVVGFEVETVSVSHKELKFHGD---TCNFPDSARPQLVNPNGETQLYFTYSVEW 244
                                      |:.|:|:   ..|.....:.:|| ||  |::..:|||:|
  Rat   160 --------------------------EIGFNGNRIVDVNLTSEGKVKLV-PN--TKIQMSYSVKW 195

  Fly   245 KESKVSWASRWDIYLGMRDVQ--IHWFSIINSLVVVFFLSGILTMIMIRTLRRDIARYN----TD 303
            |:|.|.:..|:|.||.....|  ||||||.||.::|.||.|:::||::||||:|.|||:    .|
  Rat   196 KKSDVKFEDRFDKYLDPSFFQHRIHWFSIFNSFMMVIFLVGLVSMILMRTLRKDYARYSKEEEMD 260

  Fly   304 DNIEDTLEETGWKLVHGDVFRPPKNTRLFSAIIGSGIQIFFMALITIFFAMLGMLSPSSRGALMT 368
            |...|..:|.|||.||||||||..:..:||::||||.|||.::||.|..||:..|. :.||::::
  Rat   261 DMDRDLGDEYGWKQVHGDVFRPSSHPLIFSSLIGSGCQIFAVSLIVIIVAMIEDLY-TERGSMLS 324

  Fly   369 SGIFMYVFMGTIAGYYAARLYKTMKGREWKRAAFLTATLYPGIVFGTGFFLNFFIWDKSSSGAVP 433
            :.||:|.....:.||:...||....||.|.:..|:.|.|.|.:|.||.||:||......:|.|:|
  Rat   325 TAIFVYAATSPVNGYFGGSLYARQGGRRWIKQMFIGAFLIPAMVCGTAFFINFIAIYYHASRAIP 389

  Fly   434 FTTMISLLLLWFGISVPLVYLGFYLG--YRKQPYQHPVRTNMIPRQVPTQHWYMNAVLSTLMAGI 496
            |.||:::..:.|.:.:||..:|..||  ...|| ..|.|.|.:||.:|.:.|:|...:...:.||
  Rat   390 FGTMVAVCCICFFVILPLNLVGTILGRNLSGQP-NFPCRVNAVPRPIPEKKWFMEPAVIVCLGGI 453

  Fly   497 LPFGAVFIELFFVFTAIWQNQFYYLFGFLFLVFCILVVSCAQISIVMTYFQLCGEDYRWWWRSFV 561
            ||||::|||::|:||:.|..:.||::||:.||..||.:....::||.|||.|..|||||.|.||:
  Rat   454 LPFGSIFIEMYFIFTSFWAYKIYYVYGFMMLVLVILCIVTVCVTIVCTYFLLNAEDYRWQWTSFL 518

  Fly   562 VSGGSAVYVLFYSIFYFFTKLEITEFIPTLLYLGYTGLMVLTFWLLTGSIGFFAAYVFILRIYGA 626
            .:..:|:||..||.:|:|.|.::.....|..|.||..:......::.|:||:.....|:.:||..
  Rat   519 SAASTAIYVYMYSFYYYFFKTKMYGLFQTSFYFGYMAVFSTALGIMCGAIGYMGTSAFVRKIYTN 583

  Fly   627 VKID 630
            ||||
  Rat   584 VKID 587

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
TM9SF4NP_609669.1 EMP70 57..587 CDD:460774 189/542 (35%)
Tm9sf3NP_001414741.1 None

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