DRSC/TRiP Functional Genomics Resources

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Protein Alignment TM9SF4 and Tm9sf4

DIOPT Version :10

Sequence 1:NP_609669.1 Gene:TM9SF4 / 34778 FlyBaseID:FBgn0028541 Length:630 Species:Drosophila melanogaster
Sequence 2:XP_006235346.1 Gene:Tm9sf4 / 296279 RGDID:1307768 Length:644 Species:Rattus norvegicus


Alignment Length:634 Identity:406/634 - (64%)
Similarity:495/634 - (78%) Gaps:19/634 - (2%)


- Green bases have known domain annotations that are detailed below.


  Fly    14 VLLAGVVLVADSFYVPGVAPVEFVQDQKIDVKAVKMTSSRTQLPYQYYSLRFCYPKNGTLIFKSE 78
            :||..:.....:||||||||:.|.|:..:::||||:|||||||||:||||.||.|..  :.:|:|
  Rat    13 LLLLCLTCKGSTFYVPGVAPINFHQNDPVEIKAVKLTSSRTQLPYEYYSLPFCQPNK--ITYKAE 75

  Fly    79 NLGEVLRGDRIVNTPYEVRMNQQVNCRLLCNQKDRPLTWSKEDSALVAERIQHEYFVHLLVDNLP 143
            |||||||||||||||::|.||.:..|.:||.|.::|:..:.|.|.||||||..||:|||:.||||
  Rat    76 NLGEVLRGDRIVNTPFQVLMNSEKKCEVLCGQSNKPVILTVEQSRLVAERITEEYYVHLIADNLP 140

  Fly   144 VATR--IVSVNNPA-------EVTYEHGYRLGQVDGDNIYINNHLKFILSYHMHSKDK-----YR 194
            ||||  :.|.|..:       :|.:|||||||..|.:.||::|||.|||.||....::     ||
  Rat   141 VATRLELYSSNRDSDDKKKEKDVQFEHGYRLGFTDVNKIYLHNHLSFILYYHREDTEEDQEHTYR 205

  Fly   195 VVGFEVETVSVSHKELKF-HGDTCNFPDSAR--PQLVNPNGETQLYFTYSVEWKESKVSWASRWD 256
            ||.|||...|:..::||. ...:|..|:.|.  ||.::|..|.||||||||.|:||.:.||||||
  Rat   206 VVRFEVIPQSIRLEDLKIDEKSSCTLPEGANSLPQEIDPTKENQLYFTYSVHWEESDIKWASRWD 270

  Fly   257 IYLGMRDVQIHWFSIINSLVVVFFLSGILTMIMIRTLRRDIARYNTDDNIEDTLEETGWKLVHGD 321
            .||.|.||||||||||||:||||||||||:||:|||||:|||.||.:|:||||:||:||||||||
  Rat   271 TYLTMSDVQIHWFSIINSVVVVFFLSGILSMIIIRTLRKDIANYNKEDDIEDTMEESGWKLVHGD 335

  Fly   322 VFRPPKNTRLFSAIIGSGIQIFFMALITIFFAMLGMLSPSSRGALMTSGIFMYVFMGTIAGYYAA 386
            |||||:...:.|:::|||||:|.|.||.||.||||||||||||||||:..|:::|||...|:.|.
  Rat   336 VFRPPQYPMILSSLLGSGIQLFCMILIVIFVAMLGMLSPSSRGALMTTACFLFMFMGVFGGFSAG 400

  Fly   387 RLYKTMKGREWKRAAFLTATLYPGIVFGTGFFLNFFIWDKSSSGAVPFTTMISLLLLWFGISVPL 451
            |||:|:||..||:.||.|||||||:|||..|.||.|||.|.|||||||.||::||.:|||||:||
  Rat   401 RLYRTLKGHRWKKGAFCTATLYPGVVFGICFVLNCFIWGKHSSGAVPFPTMVALLCMWFGISLPL 465

  Fly   452 VYLGFYLGYRKQPYQHPVRTNMIPRQVPTQHWYMNAVLSTLMAGILPFGAVFIELFFVFTAIWQN 516
            ||||:|.|:|||||.:|||||.||||:|.|.||||..:..||||||||||:||||||:|:|||:|
  Rat   466 VYLGYYFGFRKQPYDNPVRTNQIPRQIPEQRWYMNRFVGILMAGILPFGAMFIELFFIFSAIWEN 530

  Fly   517 QFYYLFGFLFLVFCILVVSCAQISIVMTYFQLCGEDYRWWWRSFVVSGGSAVYVLFYSIFYFFTK 581
            |||||||||||||.||||||:||||||.|||||.||||||||:|:||||||.|||.|:||||..|
  Rat   531 QFYYLFGFLFLVFIILVVSCSQISIVMVYFQLCAEDYRWWWRNFLVSGGSAFYVLVYAIFYFVNK 595

  Fly   582 LEITEFIPTLLYLGYTGLMVLTFWLLTGSIGFFAAYVFILRIYGAVKID 630
            |:|.||||:|||.|||.||||:||||||:|||:|||:|:.:||.|||||
  Rat   596 LDIVEFIPSLLYFGYTTLMVLSFWLLTGTIGFYAAYMFVRKIYAAVKID 644

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
TM9SF4NP_609669.1 EMP70 57..587 CDD:460774 349/546 (64%)
Tm9sf4XP_006235346.1 EMP70 56..601 CDD:460774 349/546 (64%)

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