DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment TM9SF4 and Y41D4A.4

DIOPT Version :9

Sequence 1:NP_001285907.1 Gene:TM9SF4 / 34778 FlyBaseID:FBgn0028541 Length:630 Species:Drosophila melanogaster
Sequence 2:NP_001368302.1 Gene:Y41D4A.4 / 176983 WormBaseID:WBGene00021506 Length:589 Species:Caenorhabditis elegans


Alignment Length:606 Identity:191/606 - (31%)
Similarity:300/606 - (49%) Gaps:86/606 - (14%)


- Green bases have known domain annotations that are detailed below.


  Fly     8 RPCLAIVLLAGVVLVADSFYVPGVAPVEFVQDQKIDVKAVKMTS-----SRTQLPYQYYSLRFCY 67
            |..::::|...:::.||          |.....::|.:.|...:     |..|..|.|:||.||.
 Worm     2 RVLISLLLFTSLLVEAD----------EHDHLYEVDEEVVLWMNTVGPYSNRQETYTYFSLPFCK 56

  Fly    68 PKNGTLIFKSENLGEVLRGDRIVNTPYEVRMNQQVNCRLLCNQKDRPLTWSKEDSALVAERIQHE 132
            .:...:....|.:||.|.|..:..:..:::........::|.:|   ||.:...:.|.|  ||:.
 Worm    57 GEKKEIGHYHETMGESLLGVELEFSGLDIKFRTNTKKTVVCEKK---LTETDYKTLLYA--IQNS 116

  Fly   133 YFVHLLVDNLPVATRIVSVNN----PAEVTYEH-----GYRLGQVDGDNIYINNHLKFILSYHMH 188
            |:..:.:|::|:...:..::|    ||...|.|     ||...||...|:..:..:.        
 Worm   117 YYYQMYLDDMPIWGMVGEIDNTVNPPAYKLYTHKRLDIGYNDKQVVDVNLTTDGRVD-------- 173

  Fly   189 SKDKYRVVGFEVETVSVSHKELKFHGDTCNFPDSARPQLVNPNGETQLYFTYSVEWKESKVSWAS 253
                                                   :.|..|  |.|||.|:|.:|:|.:..
 Worm   174 ---------------------------------------IRPGAE--LTFTYEVQWSKSEVDFTK 197

  Fly   254 RWDIYLGMRDVQ--IHWFSIINSLVVVFFLSGILTMIMIRTLRRDIARYNTDDNIE----DTLEE 312
            |:|.||.....|  ||||||.||.::|.||.|::.||::||||:|.|||..:|:::    |..:|
 Worm   198 RFDKYLDPSFFQHRIHWFSIFNSFMMVVFLVGLVWMILVRTLRKDYARYQKEDSLDDLDADLGDE 262

  Fly   313 TGWKLVHGDVFRPPKNTRLFSAIIGSGIQIFFMALITIFFAMLGMLSPSSRGALMTSGIFMYVFM 377
            .|||.|||||||||....|||:.||:|..:|.:|:||...|::|... :.||:|:::.||:|...
 Worm   263 YGWKQVHGDVFRPPSMPLLFSSCIGAGYHVFTVAVITTILAIVGEFY-TERGSLLSAAIFVYAAC 326

  Fly   378 GTIAGYYAARLYKTMKGREWKRAAFLTATLYPGIVFGTGFFLNFFIWDKSSSGAVPFTTMISLLL 442
            ..:.||....:|....||.|.:...|.|.|.|.:|.|..|.:||......:|.|:|||.|:::..
 Worm   327 SPVNGYAGGSMYARFGGRHWIKQMLLGAFLLPSMVCGVAFLINFIAIYYHASRAIPFTIMLAVSA 391

  Fly   443 LWFGISVPLVYLGFYLGYRKQ-PYQHPVRTNMIPRQVPTQHWYMNAVLSTLMAGILPFGAVFIEL 506
            :...:.:||..:|..:|.... ...:|.|.|.:||.:|.:.|::...|.||..|:||||::|||:
 Worm   392 ICLFVILPLTLVGTVIGRNMAGSADYPCRVNAVPRPIPDKKWFVQPWLITLAGGVLPFGSIFIEM 456

  Fly   507 FFVFTAIWQNQFYYLFGFLFLVFCILVVSCAQISIVMTYFQLCGEDYRWWWRSFVVSGGSAVYVL 571
            :|:||:.|..:.||::||:.||..||.:....::||.:||.|..|||||.|.||.....:|.||.
 Worm   457 YFIFTSFWAYKIYYVYGFMLLVTIILSIVTVCVTIVCSYFLLNAEDYRWRWTSFACGASTAFYVY 521

  Fly   572 FYSIFYFFTKLEITEFIPTLL 592
            .||::|||.|.:...|...||
 Worm   522 MYSMYYFFFKTKYACFYSKLL 542

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
TM9SF4NP_001285907.1 EMP70 57..587 CDD:281048 179/545 (33%)
Y41D4A.4NP_001368302.1 EMP70 47..533 CDD:397233 179/540 (33%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 1 1.010 - - QHG53553
OrthoDB 1 1.010 - - D135708at33208
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
32.930

Return to query results.
Submit another query.