DRSC - DRSC Integrative Ortholog Prediction Tool

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Protein Alignment CG9014 and Traf1

DIOPT Version :9

Sequence 1:	NP_001285905.1	Gene:	CG9014 / 34777	FlyBaseID:	FBgn0028847	Length:	328	Species:	Drosophila melanogaster
Sequence 2:	NP_001258169.1	Gene:	Traf1 / 687813	RGDID:	1596290	Length:	409	Species:	Rattus norvegicus

Alignment Length:	213	Identity:	48/213 - (22%)
Similarity:	78/213 - (36%)	Gaps:	72/213 - (33%)

- Green bases have known domain annotations that are detailed below.

  Fly    13 DEELICPICTDVLEEPVQSSECEHAFCRACIDKWMIQKQICP-VDRSGLL--------------- 61
            |||.|||.|.....:||.....            :.|:::.| |..:|::
  Rat    43 DEERICPKCRADGLQPVSPGSL------------LTQEKVLPDVAEAGIVCPFAGVGCSFKGSPQ 95

  Fly    62 ----------TSHLVPVSRLMRNMLSRLKIKCTFSQSGCAQMLALEEFRTHV---AACEHNPKVV 113
                      :|||.    |:..:|...| .......|.|.| |||:..:.:   .|.|....:.
  Rat    96 SVQEHEATSQSSHLY----LLLGVLKEWK-SSPGPNLGSAPM-ALEQNLSELQLQEAVEVTGDLE 154

  Fly   114 VECSKG--CGMKVPKDEMSRHNCVFE--LRELVEKLA----------KEV--------SDLKQKQ 156
            |:|.:.  |   ..::|::..:.:.|  |.:|.|||.          |||        :.:.|.|
  Rat   155 VDCYRAPCC---ESQEELALQHLLKEKLLAQLEEKLRVFANIVAVLNKEVEASHLALAASIHQSQ 216

  Fly   157 SDMEEQSSSQRREMELFQ 174
            .|.|...:.::|.:||.|
  Rat   217 LDREHVLNLEQRVVELQQ 234

Known Domains:

Indicated by green bases in alignment.

Gene	Sequence	Domain	Region	External ID	Identity
CG9014	NP_001285905.1	zf-C3HC4	18..55	CDD:278524	7/37 (19%)
CG9014	NP_001285905.1	USP8_interact	137..319	CDD:286082	17/58 (29%)
Traf1	NP_001258169.1	TRAF_BIRC3_bd	180..237	CDD:406958	16/55 (29%)
Traf1	NP_001258169.1	MATH_TRAF1	260..406	CDD:239748
Blue background indicates that the domain is not in the aligned region.

Information from Original Tools:

Tool	Simple Score	Weighted Score	Original Tool Information
Tool	Simple Score	Weighted Score	BLAST Result	Score	Score Type	Cluster ID
Compara	0	0.000	Not matched by this tool.
Domainoid	0	0.000	Not matched by this tool.
eggNOG	1	0.900	-	-		E1_KOG0297
Hieranoid	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
OMA	0	0.000	Not matched by this tool.
OrthoDB	1	1.010	-	-		D918518at2759
OrthoFinder	0	0.000	Not matched by this tool.
OrthoInspector	0	0.000	Not matched by this tool.
orthoMCL	0	0.000	Not matched by this tool.
Panther	0	0.000	Not matched by this tool.
Phylome	1	0.910	-	-
SonicParanoid	0	0.000	Not matched by this tool.
SwiftOrtho	0	0.000	Not matched by this tool.
TreeFam	0	0.000	Not matched by this tool.
	3	2.820