DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG9014 and Rnf138

DIOPT Version :9

Sequence 1:NP_001285905.1 Gene:CG9014 / 34777 FlyBaseID:FBgn0028847 Length:328 Species:Drosophila melanogaster
Sequence 2:NP_997506.1 Gene:Rnf138 / 56515 MGIID:1929211 Length:245 Species:Mus musculus


Alignment Length:174 Identity:42/174 - (24%)
Similarity:73/174 - (41%) Gaps:31/174 - (17%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MGFDLNCIVGHVDEELICPICTDVLEEPVQSSECEHAFCRACIDKWMIQKQI-CPVDRSGLLT-- 62
            |..:|:....:.:::..||:|.:||:.||:::.|:|.|||.|....|.:..| ||:.| |.:|  
Mouse     1 MSEELSAATSYTEDDFYCPVCQEVLKTPVRTAACQHVFCRKCFLTAMRESGIHCPLCR-GSVTRR 64

  Fly    63 SHLVPVSRL-MRNMLSRLKIKCTFSQSGCAQMLALEEFRTHVAAC-----EHNPKVVVECSKGCG 121
            ....|...| :.|::.|....|..    |::.:.....|.|..:|     |:....|:.     .
Mouse    65 ERACPERALDLENIMRRFSGSCRC----CSKKIKFYRMRHHYKSCKKYQDEYGVSSVIP-----N 120

  Fly   122 MKVPKDEMSRHNCVFELRELVEKLAKEVSDLKQKQSDMEEQSSS 165
            .|:.:|.:...|            ..|.|.....::..|:.|||
Mouse   121 FKISQDSVRSSN------------RSETSASDNTETYQEDTSSS 152

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG9014NP_001285905.1 zf-C3HC4 18..55 CDD:278524 16/37 (43%)
USP8_interact 137..319 CDD:286082 6/29 (21%)
Rnf138NP_997506.1 RING-HC_RNF138 14..59 CDD:319458 18/45 (40%)
zf_C2HC_14 80..112 CDD:408358 6/35 (17%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 128..154 7/37 (19%)
zf-Di19 156..215 CDD:398954
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 1 0.950 - 0 Normalized mean entropy S7288
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
21.860

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