DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG9014 and traf2b

DIOPT Version :10

Sequence 1:NP_609668.2 Gene:CG9014 / 34777 FlyBaseID:FBgn0028847 Length:328 Species:Drosophila melanogaster
Sequence 2:XP_683631.2 Gene:traf2b / 557526 ZFINID:ZDB-GENE-030131-5345 Length:532 Species:Danio rerio


Alignment Length:314 Identity:65/314 - (20%)
Similarity:103/314 - (32%) Gaps:125/314 - (39%)


- Green bases have known domain annotations that are detailed below.


  Fly    18 CPICTDVLEEPVQSSECEHAFCRACIDKWMIQKQIC---PV------------DRSGLLTSHLVP 67
            |..|.|:|.:|.| ::|.|.||..|.      ||:.   |:            :.:.:|...:..
Zfish    45 CQQCKDILRKPFQ-AQCGHRFCVFCF------KQLTSSGPIPCEACRAEGIFEEETSVLNIAVAF 102

  Fly    68 VSRLMRNMLSRLKIKCTFSQSGCAQMLALEEF-----------RTHVAACE----------HN-- 109
            .....|..:..|..||  ...||:....|::|           |....||:          ||  
Zfish   103 PDNAARREIDSLPAKC--PNEGCSWSGTLKDFENQHEGRCAFERVKCEACQVLILLSEKDRHNER 165

  Fly   110 ----------------------------PKVVVECSKGCG-MKVPKDEMSRHN---------CVF 136
                                        .|..::| |.|| .|:|:::...|.         |.|
Zfish   166 ECEARTLNCKYCKVTFNFKEIKAHDEICQKFPMQC-KDCGKKKIPREKFQEHTKSCAKSKSACQF 229

  Fly   137 ELRELVEKLAKEVSDLKQKQSDMEEQSSSQRREMELFQYYIAALRSTNPMLRNIGEQLDRFSLMQ 201
              ||:..:..  |.:.||::   .||:|.    ||..:..:|.|.|........||         
Zfish   230 --REIGCRAV--VDNCKQQE---HEQTSI----MEHLRLMLALLSSMRLRAEGAGE--------- 274

  Fly   202 W----GHGL-------PLANIHTWG--------SLISTPDNPMHLMVRDVLRES 236
            |    |.||       |.|..|..|        ..::|.:|.:.::.::|.|.:
Zfish   275 WQEDVGLGLYRGPEDAPPAGAHNVGRGGGPGVQKKVTTLENIVCVLNKEVERSA 328

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG9014NP_609668.2 RING_Ubox 15..57 CDD:473075 14/53 (26%)
USP8_interact 137..319 CDD:430333 27/119 (23%)
traf2bXP_683631.2 RING_Ubox 42..83 CDD:473075 14/44 (32%)
zf-TRAF 189..246 CDD:280357 15/64 (23%)
TRAF_BIRC3_bd 307..360 CDD:465226 4/22 (18%)
MATH_TRAF2 365..528 CDD:239747
Blue background indicates that the domain is not in the aligned region.

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