DRSC - DRSC Integrative Ortholog Prediction Tool

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Protein Alignment CG9014 and Traf4

DIOPT Version :9

Sequence 1:	NP_001285905.1	Gene:	CG9014 / 34777	FlyBaseID:	FBgn0028847	Length:	328	Species:	Drosophila melanogaster
Sequence 2:	NP_001100487.1	Gene:	Traf4 / 303285	RGDID:	1306708	Length:	470	Species:	Rattus norvegicus

Alignment Length:	137	Identity:	41/137 - (29%)
Similarity:	64/137 - (46%)	Gaps:	9/137 - (6%)

- Green bases have known domain annotations that are detailed below.

  Fly     2 GFDLNCIVGHVDEELICPICTDVLEEPVQSSECEHAFCRACIDKWMIQKQI-CPVDRSGLLTSHL 65
            |||.. .:......|:||:|...:.||||.|.|.|.||..|:.:::.:... ||.|:..|..:.:
  Rat     3 GFDYK-FLEKPKRRLLCPLCGKPMREPVQVSTCGHRFCDTCLQEFLSEGVFKCPEDQLPLDYAKI 66

  Fly    66 VPVSRLMRNMLSRLKIKCTFSQSGCAQMLALEEFRTHVAACEHNPKVVVECSKGCGMKVPKDEMS 130
            .|...|...:|. |.|:|..|:.||.....|...:.|:..|..|   ||.|...|..|:.:.::.
  Rat    67 YPDPELEVQVLG-LAIRCIHSEEGCRWSGPLRHLQGHLNTCSFN---VVPCPNRCPAKLSRRDLP 127

  Fly   131 ---RHNC 134
               :|:|
  Rat   128 AHLQHDC 134

Known Domains:

Indicated by green bases in alignment.

Gene	Sequence	Domain	Region	External ID	Identity
CG9014	NP_001285905.1	zf-C3HC4	18..55	CDD:278524	14/37 (38%)
CG9014	NP_001285905.1	USP8_interact	137..319	CDD:286082
Traf4	NP_001100487.1	mRING-HC-C3HC3D_TRAF4	15..59	CDD:319555	17/43 (40%)
		zf-TRAF	102..156	CDD:280357	10/36 (28%)
		zf-TRAF	210..269	CDD:280357
		MATH_TRAF4	308..463	CDD:239750
Blue background indicates that the domain is not in the aligned region.

Information from Original Tools:

Tool	Simple Score	Weighted Score	Original Tool Information
Tool	Simple Score	Weighted Score	BLAST Result	Score	Score Type	Cluster ID
Compara	0	0.000	Not matched by this tool.
Domainoid	0	0.000	Not matched by this tool.
eggNOG	1	0.900	-	-		E1_KOG0297
Hieranoid	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
OMA	0	0.000	Not matched by this tool.
OrthoDB	0	0.000	Not matched by this tool.
OrthoFinder	0	0.000	Not matched by this tool.
OrthoInspector	0	0.000	Not matched by this tool.
orthoMCL	0	0.000	Not matched by this tool.
Panther	0	0.000	Not matched by this tool.
Phylome	1	0.910	-	-
SonicParanoid	0	0.000	Not matched by this tool.
SwiftOrtho	1	1.000	-	-
TreeFam	0	0.000	Not matched by this tool.
	3	2.810