DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG9014 and Traf7

DIOPT Version :9

Sequence 1:NP_001285905.1 Gene:CG9014 / 34777 FlyBaseID:FBgn0028847 Length:328 Species:Drosophila melanogaster
Sequence 2:NP_001165584.1 Gene:Traf7 / 224619 MGIID:3042141 Length:669 Species:Mus musculus


Alignment Length:326 Identity:62/326 - (19%)
Similarity:106/326 - (32%) Gaps:124/326 - (38%)


- Green bases have known domain annotations that are detailed below.


  Fly    15 ELICPICTDVLEEPVQSSECEHAFCRACIDKWMIQKQICPVDRSGLLTSHLVPVSRL-MRNMLSR 78
            :|.|.:|..|.::||.:: |.|.|||.|    .::.:.||||.:.|    .|.|:.: :...:..
Mouse   127 KLCCQLCCSVFKDPVITT-CGHTFCRRC----ALKSEKCPVDNAKL----TVVVNNIAVAEQIGE 182

  Fly    79 LKIKC---------------TFSQSGCAQMLALEEFRTHVAACEHNPKVVVEC------------ 116
            |.|.|               .....||...:.|...:.|.::|::.|   |.|            
Mouse   183 LFIHCRHGCHAAGTGKPGVFEVDPRGCPFTIKLSARKDHESSCDYRP---VRCPNNPSCPPLLKM 244

  Fly   117 ----------------SK-GCGMKVPKDEMSRH--NCVFE------------------------- 137
                            || ||.....:|....|  .|.||                         
Mouse   245 NLEAHLKECEHIKCPHSKYGCTFIGNQDTYETHLETCRFEGLKEFLQQTDDRFHEMHVALAQKDQ 309

  Fly   138 ----LRELVEKLAKEVSDLK-----------QKQSDMEEQSSSQRREMELFQYYIAALRSTNPML 187
                ||.::.||::::..|:           :.||.:.|.....||:..:.          |..|
Mouse   310 EIAFLRSMLGKLSEKIDQLEKSLELKFDVLDENQSKLSEDLMEFRRDASML----------NDEL 364

  Fly   188 RNIGEQLDRFSLMQW-------------GHGLPL--ANIHTWGSLISTPDNPMHLMVRDVLRESG 237
            .:|..:|:...|..:             ||..|:  ..:::.|.|:.:..:...:.|.|......
Mouse   365 SHINARLNMGILGSYDPQQIFKCKGTFVGHQGPVWCLCVYSMGDLLFSGSSDKTIKVWDTCTTYK 429

  Fly   238 C 238
            |
Mouse   430 C 430

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG9014NP_001285905.1 zf-C3HC4 18..55 CDD:278524 12/36 (33%)
USP8_interact 137..319 CDD:286082 24/157 (15%)
Traf7NP_001165584.1 RING 130..162 CDD:214546 12/36 (33%)
Sina 206..>279 CDD:302762 14/75 (19%)
DD_cGKI 281..321 CDD:213458 5/39 (13%)
WD40 <379..667 CDD:225201 8/52 (15%)
WD40 387..667 CDD:238121 8/44 (18%)
WD40 repeat 442..476 CDD:293791
WD40 repeat 481..516 CDD:293791
WD40 repeat 526..555 CDD:293791
WD40 repeat 561..595 CDD:293791
WD40 repeat 603..638 CDD:293791
WD40 repeat 645..667 CDD:293791
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG0297
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
21.810

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