DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG9014 and Traf5

DIOPT Version :9

Sequence 1:NP_001285905.1 Gene:CG9014 / 34777 FlyBaseID:FBgn0028847 Length:328 Species:Drosophila melanogaster
Sequence 2:NP_035763.2 Gene:Traf5 / 22033 MGIID:107548 Length:558 Species:Mus musculus


Alignment Length:305 Identity:61/305 - (20%)
Similarity:107/305 - (35%) Gaps:88/305 - (28%)


- Green bases have known domain annotations that are detailed below.


  Fly     9 VGHVDEELICPICTDVLEEPVQSSECEHAFCRACID--KWMIQKQICPVDRSGLLTSHLVPVSRL 71
            |..::|...|..|..||..|.|:. |.|.||:.||.  :.:....|||||:..:....:...:..
Mouse    36 VEQLEERYKCAFCHSVLHNPHQTG-CGHRFCQQCIRSLRELNSVPICPVDKEVIKPQEVFKDNCC 99

  Fly    72 MRNMLSRLKIKCTFSQSGCAQMLALEEFRTHVAAC------------------------------ 106
            .|.:|: |.:.|. :..||...:.|..|:.|:..|                              
Mouse   100 KREVLN-LHVYCK-NAPGCNARIILGRFQDHLQHCSFQAVPCPNESCREAMLRKDVKEHLSAYCR 162

  Fly   107 ---------------------EHN--PKVVVECSKGCGMKVPKDEMSRH---------NCVF--- 136
                                 |.|  |...|.|...|...:|:..::.|         :|.|   
Mouse   163 FREEKCLYCKRDIVVTNLQDHEENSCPAYPVSCPNRCVQTIPRARVNEHLTVCPEAEQDCPFKHY 227

  Fly   137 ------ELRELVEKLAKEVSD----LKQKQSDMEEQSSSQRREMELFQYYIAALRSTNPMLRNIG 191
                  :...|:|.....:.|    :.:|...:|::.|...:.:|..:..|..|..|   ::...
Mouse   228 GCTVKGKRGNLLEHERAALQDHMLLVLEKNYQLEQRISDLYQSLEQKESKIQQLAET---VKKFE 289

  Fly   192 EQLDRFSLMQWGHGLPLANIHTWGSLISTPDNP--MHLMVRDVLR 234
            ::|.:|:.|...:|..|:|:.   :|.|..|..  :...||.:|:
Mouse   290 KELKQFTQMFGRNGTFLSNVQ---ALTSHTDKSAWLEAQVRQLLQ 331

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG9014NP_001285905.1 zf-C3HC4 18..55 CDD:278524 14/38 (37%)
USP8_interact 137..319 CDD:286082 22/104 (21%)
Traf5NP_035763.2 mRING-HC-C3HC3D_TRAF5 43..85 CDD:319556 16/42 (38%)
zf-TRAF 128..183 CDD:280357 2/54 (4%)
zf-TRAF 185..241 CDD:424248 10/55 (18%)
Smc <237..>419 CDD:224117 22/101 (22%)
Interaction with EIF2AK2/PKR. /evidence=ECO:0000250 345..558
MATH_TRAF5 404..551 CDD:239749
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.910

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