DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG9014 and rnf41

DIOPT Version :10

Sequence 1:NP_609668.2 Gene:CG9014 / 34777 FlyBaseID:FBgn0028847 Length:328 Species:Drosophila melanogaster
Sequence 2:XP_002934542.1 Gene:rnf41 / 100489964 XenbaseID:XB-GENE-943148 Length:317 Species:Xenopus tropicalis


Alignment Length:321 Identity:143/321 - (44%)
Similarity:213/321 - (66%) Gaps:4/321 - (1%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MGFDLNCIVGHVDEELICPICTDVLEEPVQSSECEHAFCRACIDKWMIQKQICPVDRSGLLTSHL 65
            ||:|::...|.|||:||||||:.|||||||:..||||||.|||.:|..|:|.||||||.:..:||
 Frog     1 MGYDVSRFQGDVDEDLICPICSGVLEEPVQAPHCEHAFCNACITQWFSQQQTCPVDRSVVTVAHL 65

  Fly    66 VPVSRLMRNMLSRLKIKCTFSQSGCAQMLALEEFRTHVAACEHNPKVVVECSKGCGMKVPKDEMS 130
            .||.|:||||||:|:|.|..:..||..::.|:...:|::.||||||..|.|.:|||:::||||:.
 Frog    66 RPVPRIMRNMLSKLQITCDNAVFGCTTIVRLDNLMSHLSDCEHNPKRPVTCEQGCGLEMPKDELP 130

  Fly   131 RHNCVFELRELVEKLAKEVSDLKQKQSDMEEQSSSQRREMELFQYYIAALRSTNPMLRNIGEQLD 195
            .|||:..||.:|::....:.:|::..::.:.|.|.|:|:::|.:.|:.|:||.||.|:|:.|.::
 Frog   131 NHNCIKHLRSVVQQQQIRIGELEKAAAESKHQLSEQKRDIQLLKAYMRAIRSANPNLQNLEETIE 195

  Fly   196 RFSLMQWGHGLPLANIHTWGSLISTPDNPMHLMVRDVLRESGCPMHMLNMLVERCHEDRWPEGLM 260
            ...:::|.:.|..|.:..||.:|||||..:..:::..|.|||||..::|.|:|..||..||:||.
 Frog   196 YNEILEWVNSLQPARVTRWGGMISTPDAVLQAVIKRSLVESGCPASIVNELIENAHERNWPQGLA 260

  Fly   261 TLDDRRENQHLMSRYVTRLVPGLVIGKPCVVVLGGENTHMPENLRPILGLVMIFVDGVNEV 321
            ||:.|:.|:.....||.:.:|    ||..|||:..||.||.|::....||||||..||.|:
 Frog   261 TLETRQMNRRYYENYVAKRIP----GKQAVVVMACENQHMGEDMVLEPGLVMIFAHGVEEI 317

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG9014NP_609668.2 RING_Ubox 15..57 CDD:473075 28/41 (68%)
USP8_interact 137..319 CDD:430333 67/181 (37%)
rnf41XP_002934542.1 mRING-HC-C3HC3D_Nrdp1 15..57 CDD:438296 28/41 (68%)
USP8_interact 137..315 CDD:430333 67/181 (37%)

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