DRSC/TRiP Functional Genomics Resources

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Protein Alignment Gpo3 and SDP6

DIOPT Version :10

Sequence 1:NP_609667.2 Gene:Gpo3 / 34776 FlyBaseID:FBgn0028848 Length:626 Species:Drosophila melanogaster
Sequence 2:NP_187648.1 Gene:SDP6 / 820199 AraportID:AT3G10370 Length:629 Species:Arabidopsis thaliana


Alignment Length:571 Identity:212/571 - (37%)
Similarity:318/571 - (55%) Gaps:39/571 - (6%)


- Green bases have known domain annotations that are detailed below.


  Fly     4 VPSRAEHVNALKA----EEFDVLIIGGGAVGCGCAVDAACRGLKTALIEAEDFASGSSSRTSKLI 64
            ||||:...:||.|    :..|||:|||||.|.|.|:||..|||:..|:|.|||:||:|||::|||
plant    55 VPSRSAQESALIAATASDPLDVLVIGGGATGSGVALDAVTRGLRVGLVEREDFSSGTSSRSTKLI 119

  Fly    65 DGSGSYLGTALREKDVEQLYIMLQMMSERVTMLKNAPHLNRIQPMIIPIYSFLQMPCTWLGLKVY 129
            .|...||..|:...|..||.::...:.||..:::|||||....|.:.|.:.:.::...|:|||:|
plant   120 HGGVRYLEKAVFNLDYGQLKLVFHALEERKQLIENAPHLCHALPCMTPCFDWFEVIYFWMGLKMY 184

  Fly   130 DWISAASNIRGSHIISREATMYEFPLL----KTDGLRGGVVYYDGQVDDARMCVALVMTAVALGA 190
            |.::....:..|...|.:.::..||.|    |...|||.|||||||::|:|:.|.|..||...||
plant   185 DLVAGPRLLHLSRYYSAKESIELFPTLARKGKDKNLRGTVVYYDGQMNDSRLNVGLACTAALAGA 249

  Fly   191 NVGNHMEVVEIMPQEGCCRVVS--VKDKISCEQFYIQSKAVINATGSSTDAIRQMDKEGTAPILL 253
            .|.||.|||.::..:...|::.  :::.::.::|...:|.|:||.|...|:||:|..|.|.|::.
plant   250 AVLNHAEVVSLITDDATKRIIGARIRNNLTGQEFNSYAKVVVNAAGPFCDSIRKMIDEDTKPMIC 314

  Fly   254 PTLETQVSLPRYFGSGHYGLLSPALKNDDLTVYMVPFENHMVLGSREVDLDEVSSRGSPTPDPDD 318
            |:....:.||.|:.....||:.|..| |...|:|:|:....|.|:.:   ...|....|.|..|:
plant   315 PSSGVHIVLPDYYSPEGMGLIVPKTK-DGRVVFMLPWLGRTVAGTTD---SNTSITSLPEPHEDE 375

  Fly   319 VDCLLEAAKKRMDPCVELGRCHVLSAWTAIKASVSCPTDKENDDDKRGTPINSYMIEVSPDGLIT 383
            :..:|:|....::  :::.|..|||||:.|:.....||.|..:...|    :..:.|.:| ||:|
plant   376 IQFILDAISDYLN--IKVRRTDVLSAWSGIRPLAMDPTAKSTESISR----DHVVFEENP-GLVT 433

  Fly   384 LAGGRWSSYRVMAADAVDLAIKSCGLCDDHVTSSWTQDLKLDGAESW----CCMLPLEFV---QD 441
            :.||:|::||.||.||||.||||..|  .......||.|:|.|:..|    ...|..::|   :.
plant   434 ITGGKWTTYRSMAEDAVDAAIKSGQL--KPTNECVTQKLQLLGSYGWEPSSFTTLAQQYVRMKKT 496

  Fly   442 YG---VP--MD--VAHHISDSYGYNGH--ALFSQAPDLKKRLHPSFPYIEAEIQYAMRNEYACTL 497
            ||   ||  ||  .|.|:|.:||....  |..:|...|.|||....|::|||:.|..|:||..:.
plant   497 YGGKVVPGAMDTAAAKHLSHAYGSMADRVATIAQEEGLGKRLAHGHPFLEAEVAYCARHEYCESA 561

  Fly   498 VDIIARRLRIAFVDAAATLHMLPRILKIMAGENGWDEEEQKEQMVAAQEFL 548
            ||.||||.||||:|..|....|.|:::|:|.|:.||:..||:::..|:|||
plant   562 VDFIARRCRIAFLDTDAAARALQRVVEILASEHKWDKSRQKQELQKAKEFL 612

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Gpo3NP_609667.2 DAO 3..548 CDD:477422 210/569 (37%)
SDP6NP_187648.1 PLN02464 1..629 CDD:215257 212/571 (37%)

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