DRSC/TRiP Functional Genomics Resources

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Protein Alignment Gpo3 and Y50E8A.6

DIOPT Version :9

Sequence 1:NP_609667.2 Gene:Gpo3 / 34776 FlyBaseID:FBgn0028848 Length:626 Species:Drosophila melanogaster
Sequence 2:NP_506640.2 Gene:Y50E8A.6 / 190107 WormBaseID:WBGene00013049 Length:609 Species:Caenorhabditis elegans


Alignment Length:568 Identity:196/568 - (34%)
Similarity:321/568 - (56%) Gaps:38/568 - (6%)


- Green bases have known domain annotations that are detailed below.


  Fly     4 VPSRAEHVNALKAEE-FDVLIIGGGAVGCGCAVDAACRGLKTALIEAEDFASGSSSRTSKLIDGS 67
            :|:|...:.:||.|: ||||:||||:.|.|.|:||..||||||::|..|:.||:||::|||:.|.
 Worm    47 LPTRESIIESLKTEKRFDVLVIGGGSAGAGVALDAQTRGLKTAMVEYGDYCSGTSSKSSKLLHGG 111

  Fly    68 GSYLGTALREKDVEQLYIMLQMMSERVTMLKNAPHLNRIQPMIIPIYSFLQMPCTWLGLKVYDWI 132
            ..||.|||:|.|.|...|:.:.::||:.::|:||.|::..|:::|.|.:.|....|.|:||||::
 Worm   112 VKYLETALKEFDYEHYQIVQEGLNERLNIMKSAPFLSQTFPVLVPTYKWWQKIYYWGGVKVYDFL 176

  Fly   133 SAASNIRGSHIISREATMYEFPLLKTDGLRGGVVYYDGQVDDARMCVALVMTAVALGANVGNHME 197
            :..:.::.|..:|:|..:...|.::.:||:|.::|||||.:|||:.:.:.:||:..||...||.|
 Worm   177 AGKNVLKPSKFVSKEEAIEICPTIRQEGLKGAMLYYDGQGNDARLVLVVALTAIRNGAKCVNHTE 241

  Fly   198 VVEIMPQE-GCCRVVSVKDKISCEQFYIQSKAVINATGSSTDAIRQMDKEGTAPILLPTLETQVS 261
            .:.::... |......|||.||.|.:.|.||.|:||||...|.||:|..|....|::.:....::
 Worm   242 CIGLLKDSYGKVNGALVKDHISGETYEIHSKVVVNATGPFNDHIREMADETRNKIIVGSSGIHLT 306

  Fly   262 LPRYFGSGHYGLLSPALKNDDLTVYMVPFENHMVLGSREVDLDEVSSRGSPTPDPDDVDCLLEAA 326
            :.:||..|:.||:.|. .:|...::..|:||..::|:.:   |......|||....::..:|:..
 Worm   307 VAKYFCPGNAGLIVPK-SSDGRVIFAFPWENVTIVGTTD---DPTEPSHSPTVTEKEIQYILKEM 367

  Fly   327 KKRMDPCVELGRCHVLSAWTAIKASVSCP-TDKENDDDKRGTPINSYMIEVSPDGLITLAGGRWS 390
            .:..:...|:.|..|.|.|:.|:..|..| ..||::...||     ::::|.|.||||:|||:.:
 Worm   368 NRAFEKEYEIKREDVTSIWSGIRGLVQDPKRQKEHNSLARG-----HLVDVGPTGLITIAGGKLT 427

  Fly   391 SYRVMAADAVD--------LAIKSCGLCDDHVTSSWTQDLKLDGAESWCCMLPLEFVQDYGVPMD 447
            ::|.||.:.|:        |..:.|          .|:.:..:||.::..||.....|:||:...
 Worm   428 TFRHMAEETVNKLLDINKILEAQPC----------VTRGMMFEGAHNYTSMLYRTISQNYGIEEQ 482

  Fly   448 VAHHISDSYGYNGHALF-------SQAPDLKKRLHPSFPYIEAEIQYAMRNEYACTLVDIIARRL 505
            ||.|:..:||...:.:.       .:.|.:..||||.||::|||::||:: |||....||:|||.
 Worm   483 VATHLCQTYGDKVYEVLKLCKSTGQKFPVIGHRLHPDFPFLEAEVRYAVK-EYARIPADILARRT 546

  Fly   506 RIAFVDAAATLHMLPRILKIMAGENGWDEEEQKEQMVAAQEFLVRQMG 553
            |::.:||.|...:||||:.|||.|..|...||........:||..:.|
 Worm   547 RLSLLDARAARQVLPRIVAIMAEELKWSPSEQIFYFDEGMKFLKVENG 594

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Gpo3NP_609667.2 GlpA 7..554 CDD:223651 195/565 (35%)
DAO_C 417..537 CDD:293506 46/126 (37%)
Y50E8A.6NP_506640.2 PLN02464 14..578 CDD:215257 191/550 (35%)
DAO_C 452..578 CDD:293506 47/136 (35%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C160157377
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG0578
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 1 0.950 - 0 Normalized mean entropy S668
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D232701at33208
OrthoFinder 1 1.000 - - FOG0002536
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR11985
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X1659
SwiftOrtho 1 1.000 - -
TreeFam 1 0.960 - -
109.760

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