DRSC/TRiP Functional Genomics Resources

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Protein Alignment ics and AT3G15410

DIOPT Version :9

Sequence 1:NP_001285902.1 Gene:ics / 34774 FlyBaseID:FBgn0028546 Length:283 Species:Drosophila melanogaster
Sequence 2:NP_001189901.1 Gene:AT3G15410 / 820780 AraportID:AT3G15410 Length:590 Species:Arabidopsis thaliana


Alignment Length:252 Identity:77/252 - (30%)
Similarity:127/252 - (50%) Gaps:26/252 - (10%)


- Green bases have known domain annotations that are detailed below.


  Fly     3 QSCIPVSAKMSKAKKVLDEARETHNPELDLADKGLSSFEELPG-LFNMSNITRLTLSHNKISVIS 66
            ::.|..:|:||.:.|           ||.|....||   ::|. ::....||::.||.|.|..:.
plant   353 ENVIASAARMSISSK-----------ELSLEGLNLS---DVPSEVWESGEITKVNLSKNSIEELP 403

  Fly    67 PGIANLLNLEILNLSNNQLTELP-VSLSSMPKLRILNVSINRLINLP-RGFGAFPVLEVLDLSYN 129
            ..::..::|:.|.||.|::.:.| ..|.|:|.|..|.:..|.|..:| .||.....|::||||.|
plant   404 AQLSTSVSLQTLILSRNKIKDWPGAILKSLPNLMCLKLDNNPLNQIPLDGFQVVSGLQILDLSVN 468

  Fly   130 NLNEQVLPGNFFGMETLRALYLGDNDFEYIPKEVGQLKNLQILGLRDNDLLELPREVGDLVRLRE 194
            .::.:..| .|..:..||.|||.......:|:::..|.||.||.|..|.|..:|:.:.::..|:.
plant   469 AVSFREHP-KFCHLPQLRELYLSRIQLSEVPEDILNLSNLIILDLNQNSLQSIPKGIKNMTSLKH 532

  Fly   195 LHIQNNRLQVLPPEIAQLDLLSNKSVMKMEENPWVN---PIAEQYLLGISHVIDYLK 248
            |.|.||.:..||||:..|:  ....|::::.||..:   ||.|:   |...|::|||
plant   533 LDISNNNISSLPPELGLLE--PTLEVLRLDGNPLRSIRRPILER---GTKAVLNYLK 584

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
icsNP_001285902.1 leucine-rich repeat 29..51 CDD:275380 6/22 (27%)
leucine-rich repeat 52..84 CDD:275380 10/31 (32%)
LRR_8 96..156 CDD:290566 21/60 (35%)
leucine-rich repeat 98..120 CDD:275380 7/22 (32%)
LRR 119..>222 CDD:227223 34/102 (33%)
leucine-rich repeat 121..145 CDD:275380 8/23 (35%)
leucine-rich repeat 146..168 CDD:275380 7/21 (33%)
leucine-rich repeat 169..191 CDD:275380 7/21 (33%)
AT3G15410NP_001189901.1 LRR_8 53..109 CDD:290566
leucine-rich repeat 53..75 CDD:275380
leucine-rich repeat 76..98 CDD:275380
leucine-rich repeat 99..121 CDD:275380
leucine-rich repeat 122..137 CDD:275380
leucine-rich repeat 145..167 CDD:275380
leucine-rich repeat 168..214 CDD:275380
LRR_RI <202..424 CDD:238064 22/84 (26%)
LRR_8 213..271 CDD:290566
leucine-rich repeat 215..237 CDD:275380
leucine-rich repeat 238..260 CDD:275380
LRR_8 259..316 CDD:290566
leucine-rich repeat 261..282 CDD:275380
leucine-rich repeat 306..359 CDD:275380 1/5 (20%)
LRR_RI 358..562 CDD:238064 66/220 (30%)
leucine-rich repeat 367..388 CDD:275380 7/34 (21%)
leucine-rich repeat 389..411 CDD:275380 6/21 (29%)
LRR_8 411..468 CDD:290566 21/56 (38%)
leucine-rich repeat 412..435 CDD:275380 8/22 (36%)
leucine-rich repeat 436..459 CDD:275380 7/22 (32%)
leucine-rich repeat 460..483 CDD:275380 8/23 (35%)
leucine-rich repeat 484..506 CDD:275380 7/21 (33%)
LRR_8 505..564 CDD:290566 20/60 (33%)
leucine-rich repeat 507..529 CDD:275380 7/21 (33%)
leucine-rich repeat 530..553 CDD:275380 10/24 (42%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.910

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