Sequence 1: | NP_849161.2 | Gene: | LRRTM1 / 347730 | HGNCID: | 19408 | Length: | 522 | Species: | Homo sapiens |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | NP_001369108.1 | Gene: | Fili / 5740472 | FlyBaseID: | FBgn0085397 | Length: | 789 | Species: | Drosophila melanogaster |
Alignment Length: | 627 | Identity: | 140/627 - (22%) |
---|---|---|---|
Similarity: | 229/627 - (36%) | Gaps: | 177/627 - (28%) |
- Green bases have known domain annotations that are detailed below.
Human 20 VVLCLLGACFQMLPAAPSGCPQLCRCEGRLLYCEALNLTEAPHNLSGLLGLSLRYNSL--SELRA 82
Human 83 GQFT--GLMQLTWLYLDHNHICSVQGDAFQKLRRVKELTLSSNQITQLPNTTFRPMPNLRSVDLS 145
Human 146 YNKLQALAP------------DL------------FHGLRKLTTLHMRANAIQFVPVRIFQDCRS 186
Human 187 LKFLDIGYNQLKSLARNSFAGLFKLTELHLEHNDLVKVNFAHFPRLISLHSLCLRRNKVAIV-VS 250
Human 251 SLDWVWNLEKMDLSGNE-------------------------IEYMEPHVFETVPHLQSLQLDSN 290
Human 291 --------RLTYIEPRIL------NSWKSLTS----------ITLAGNLWDCGRNVCALASWL-- 329
Human 330 ---NNFQG------RYDGNLQCASPEYAQGEDVLDAVYAFHLCEDGAEPTSG-----HLLSAVTN 380
Human 381 RSDLGPPASSATTLADGGEGQHDG-------------------------TFEPATVALPGGEHAE 420
Human 421 NAVQIHKVVTGTMALIFSFLIVVLVLYVSWKCFPASLRQLRQCFVTQRRKQKQKQTMHQMAAMSA 485
Human 486 QEYYVD--------YKP--------------NHIEGALVIIN 505 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
LRRTM1 | NP_849161.2 | LRR 1 | 64..87 | 5/26 (19%) | |
LRR_8 | 73..125 | CDD:290566 | 15/55 (27%) | ||
LRR_RI | <85..268 | CDD:238064 | 58/234 (25%) | ||
LRR 2 | 89..111 | 7/21 (33%) | |||
leucine-rich repeat | 91..114 | CDD:275380 | 6/22 (27%) | ||
LRR 3 | 112..135 | 6/22 (27%) | |||
LRR_8 | 113..173 | CDD:290566 | 21/83 (25%) | ||
leucine-rich repeat | 115..138 | CDD:275380 | 6/22 (27%) | ||
LRR 4 | 137..159 | 10/45 (22%) | |||
leucine-rich repeat | 139..162 | CDD:275380 | 10/46 (22%) | ||
LRR_8 | 161..221 | CDD:290566 | 18/59 (31%) | ||
LRR 5 | 161..183 | 6/21 (29%) | |||
leucine-rich repeat | 163..186 | CDD:275380 | 6/22 (27%) | ||
LRR 6 | 184..207 | 7/22 (32%) | |||
leucine-rich repeat | 187..210 | CDD:275380 | 9/22 (41%) | ||
LRR 7 | 209..231 | 4/21 (19%) | |||
leucine-rich repeat | 211..234 | CDD:275380 | 5/22 (23%) | ||
LRR 8 | 233..255 | 8/22 (36%) | |||
leucine-rich repeat | 235..257 | CDD:275380 | 6/22 (27%) | ||
LRR 9 | 256..278 | 6/46 (13%) | |||
LRR_8 | 257..315 | CDD:290566 | 22/106 (21%) | ||
LRR_4 | 257..297 | CDD:289563 | 14/72 (19%) | ||
leucine-rich repeat | 258..281 | CDD:275380 | 5/47 (11%) | ||
LRR 10 | 279..302 | 11/36 (31%) | |||
leucine-rich repeat | 282..300 | CDD:275380 | 8/25 (32%) | ||
leucine-rich repeat | 306..318 | CDD:275378 | 4/21 (19%) | ||
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite | 382..401 | 5/18 (28%) | |||
Fili | NP_001369108.1 | leucine-rich repeat | 75..97 | CDD:275378 | 4/21 (19%) |
leucine-rich repeat | 98..121 | CDD:275380 | 6/22 (27%) | ||
LRR_8 | 120..180 | CDD:404697 | 15/59 (25%) | ||
leucine-rich repeat | 122..145 | CDD:275380 | 6/22 (27%) | ||
leucine-rich repeat | 146..169 | CDD:275380 | 6/22 (27%) | ||
LRR | <161..>354 | CDD:227223 | 45/192 (23%) | ||
leucine-rich repeat | 170..193 | CDD:275380 | 4/22 (18%) | ||
leucine-rich repeat | 194..217 | CDD:275380 | 6/22 (27%) | ||
leucine-rich repeat | 218..265 | CDD:275380 | 14/46 (30%) | ||
leucine-rich repeat | 266..289 | CDD:275380 | 6/22 (27%) | ||
leucine-rich repeat | 290..313 | CDD:275380 | 4/22 (18%) | ||
leucine-rich repeat | 314..338 | CDD:275380 | 1/23 (4%) | ||
LRR_8 | 337..397 | CDD:404697 | 17/59 (29%) | ||
leucine-rich repeat | 339..360 | CDD:275380 | 7/20 (35%) |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 0 | 0.000 | Not matched by this tool. | |||
Domainoid | 0 | 0.000 | Not matched by this tool. | |||
eggNOG | 0 | 0.000 | Not matched by this tool. | |||
Hieranoid | 0 | 0.000 | Not matched by this tool. | |||
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
Isobase | 0 | 0.000 | Not matched by this tool. | |||
OMA | 0 | 0.000 | Not matched by this tool. | |||
OrthoDB | 0 | 0.000 | Not matched by this tool. | |||
OrthoFinder | 0 | 0.000 | Not matched by this tool. | |||
OrthoInspector | 0 | 0.000 | Not matched by this tool. | |||
orthoMCL | 0 | 0.000 | Not matched by this tool. | |||
Panther | 1 | 1.100 | - | - | LDO | PTHR24373 |
Phylome | 1 | 0.910 | - | - | ||
RoundUp | 0 | 0.000 | Not matched by this tool. | |||
SonicParanoid | 0 | 0.000 | Not matched by this tool. | |||
SwiftOrtho | 0 | 0.000 | Not matched by this tool. | |||
TreeFam | 0 | 0.000 | Not matched by this tool. | |||
User_Submission | 0 | 0.000 | Not matched by this tool. | |||
2 | 2.010 |