DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG9254 and mfs2

DIOPT Version :9

Sequence 1:NP_609664.1 Gene:CG9254 / 34773 FlyBaseID:FBgn0028513 Length:481 Species:Drosophila melanogaster
Sequence 2:NP_592802.1 Gene:mfs2 / 2542991 PomBaseID:SPAC11D3.05 Length:546 Species:Schizosaccharomyces pombe


Alignment Length:317 Identity:68/317 - (21%)
Similarity:96/317 - (30%) Gaps:135/317 - (42%)


- Green bases have known domain annotations that are detailed below.


  Fly    68 PDDQSDP-------------------------SSTFEGGDYDWSQEKQGLILAS------FYIGY 101
            |||..:|                         ||.:..|..|.:.|....|..|      |.:|:
pombe    91 PDDPLNPRNWSHSYKWWIVIQVSVITIVVTFASSVYSSGIIDIASELHSSIPVSTLGSCTFLVGF 155

  Fly   102 IVTHLPGGILADKFG-----------------------GKWTLSLGIFFTAIF------------ 131
            .|..||...|:|.:|                       ..|||::..||..:|            
pombe   156 GVGSLPFAPLSDIYGRFIIYFVTLLIFTIFQVGGGCAHNVWTLAIVRFFQGVFGSTPLANAGGTI 220

  Fly   132 -TLLTPVCIVYGGADALIVLRVLMGLGEGTTFPALSVLLASWVPANERGMLGALVLGGGQMGSIA 195
             .|.|||...|          ||.|.   .|||.|                          |.|.
pombe   221 SDLFTPVQRTY----------VLPGF---CTFPYL--------------------------GPII 246

  Fly   196 GNIISGYVLSS-MDWPWVFYVFAIIALVW---FVVFTLVCFSSPFTHPYIKPEERAFLAQEVPPP 256
            |.||..::..| ::|.|.|:    |.::|   .:||..:.|  |.||      |...|..:....
pombe   247 GPIIGDFITQSYLEWRWTFW----INMIWAAAVIVFVFIFF--PETH------EDTILDYKAKYL 299

  Fly   257 DKNKPKTPFFAI--LTSIPMWALISA-----------QIGHDWGFYIMVSYLPKYMS 300
            .|....|.::.|  ....|..|:|.|           .|...:..|:.|.|:..|::
pombe   300 RKTTGNTAYYTIHERERDPKNAMIQAATQAVSLIFTEPIVVCFTLYLTVVYIINYIN 356

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG9254NP_609664.1 2A0114euk 28..466 CDD:129972 68/317 (21%)
MFS 82..461 CDD:119392 61/278 (22%)
mfs2NP_592802.1 MFS 109..530 CDD:119392 64/299 (21%)
MFS_1 112..493 CDD:284993 64/296 (22%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
00.000

Return to query results.
Submit another query.