DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG9254 and cima-1

DIOPT Version :9

Sequence 1:NP_609664.1 Gene:CG9254 / 34773 FlyBaseID:FBgn0028513 Length:481 Species:Drosophila melanogaster
Sequence 2:NP_001294208.1 Gene:cima-1 / 24104589 WormBaseID:WBGene00018473 Length:543 Species:Caenorhabditis elegans


Alignment Length:466 Identity:115/466 - (24%)
Similarity:213/466 - (45%) Gaps:74/466 - (15%)


- Green bases have known domain annotations that are detailed below.


  Fly    39 TMRICLSQA-----ITVLVVKRNYTIFHTEAICEPDDQSDPSSTFEGGDYDWSQEKQGLILASFY 98
            :||:.|:..     ||:.:...|..:   ..||.   .|.|...: ||..:|..:::||:||:..
 Worm    65 SMRLMLAAMLCCCFITLSISSSNLAV---ALICM---TSCPVHGY-GGTLEWQSQQEGLVLAAQN 122

  Fly    99 IGYIVTHLPGGILADKFGGKWTLSLGIFFTAIFTLLTPVCIVYGGADALIVLRVLMGLGEGTTFP 163
            .|.::. :..|:.||:..|||.:.:|:....|..|:.|: :........::.|:.:|..:....|
 Worm   123 AGSLIM-IVTGMWADRLNGKWMVFIGLLLCCIGNLMLPL-LASKSFWFAVLARISIGASDACLMP 185

  Fly   164 ALSVLLASWVPANERGMLGALVLGGGQMGSIAGNIISGYVLSSMD----WPWVFYVFAIIAL--- 221
            |::.|:..|.|..||.....|:.||.|:|::.....:||:.:..|    ||.:||:.|.|::   
 Worm   186 AVNSLITRWFPQAERPAAIGLISGGRQIGTLFILPTAGYLCTRKDILDGWPAIFYLSATISVLVT 250

  Fly   222 VWFVVF------TLVCFSSPFTHPYIKPEERAFLAQEV------PPPDKNKPKTPFFAILTSIPM 274
            |:::.|      ..:|.||         .|:.|:...:      ...|:.: :.|:.|:|.|.|:
 Worm   251 VFWIPFGADKPAKQICISS---------REKEFIETRIACESIGKRTDRTR-RVPYGAMLHSKPL 305

  Fly   275 WALISAQIGHDWGFYIMVSYLPKYMSDVLRFSIKSNGLYSSLPYVTMWIMSLLSGCVADQMIKRN 339
            ||.|.|.|.|::...||:.:||.||.|||.|:...||:.::||.:.:::....|..::..:..:.
 Worm   306 WACIFALICHEYPLVIMLQFLPNYMRDVLEFAPTKNGIIAALPILCLFLSKTFSSSLSSYLTTKL 370

  Fly   340 CMSTTNTRKIMTGVAAFGPAVFMVAASYAGCNRGMVVALFTI--TMGLMGTYYAGMKLTPLDMSP 402
            .:..|...|....||:.|.|:.:....:.. .....:|:|.:  .|...|.:..|:....:.::|
 Worm   371 RLDKTFVCKGFNAVASAGLAICISFVPFFN-KESAFLAVFCLCGAMIFAGLHTPGVITAMVQIAP 434

  Fly   403 NYAGTLMAITNGIGAITG--------------VVSPYLVGVMTPNATLLEWRLVFWVAFGVLVVT 453
            .::          |.|||              :::.|:|    .:.::.||.:||.|:..|..:.
 Worm   435 AFS----------GIITGWSFFAVAWFSIGNKILTKYIV----QSGSVTEWGMVFRVSALVAALP 485

  Fly   454 AIVYCIWASGD 464
            .||:.||.|.|
 Worm   486 VIVFTIWGSAD 496

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG9254NP_609664.1 2A0114euk 28..466 CDD:129972 115/466 (25%)
MFS 82..461 CDD:119392 100/413 (24%)
cima-1NP_001294208.1 2A0114euk 63..506 CDD:129972 115/466 (25%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG2532
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 1 1.010 - - QHG28615
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 1 1.000 - - FOG0000034
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR11662
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X142
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
65.920

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