DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG9254 and Y19D10A.4

DIOPT Version :9

Sequence 1:NP_609664.1 Gene:CG9254 / 34773 FlyBaseID:FBgn0028513 Length:481 Species:Drosophila melanogaster
Sequence 2:NP_503657.2 Gene:Y19D10A.4 / 178718 WormBaseID:WBGene00021219 Length:475 Species:Caenorhabditis elegans


Alignment Length:500 Identity:113/500 - (22%)
Similarity:207/500 - (41%) Gaps:84/500 - (16%)


- Green bases have known domain annotations that are detailed below.


  Fly    15 SKFFVLPQRWILAIMGFFAIFNAYTMRICLSQAITVLVVKRNYTIFHTEAICEPD---DQSDPSS 76
            |..|..|||.|    ..|..:|...:.|.:.....:.:.:.|..||....||..|   :|...:.
 Worm    18 SDIFETPQRKI----SNFVFWNQTRVFILILSLTCMTLTQINSQIFTFTVICMDDLIVEQQTSNL 78

  Fly    77 TFEGGDYDWSQ--EKQGLILASFYIGYIVTHLPGGILADKFGGKWTLSLGIFFTAIFTLLTPVCI 139
            |    :..|.:  .::.::.::..||.:|..:|...:.:..|.:.|||.....:.:.|..||:.:
 Worm    79 T----EPHWIEGTTEKSILFSATAIGALVALIPSVPILNSLGVRLTLSFCGLCSTLGTFFTPLAV 139

  Fly   140 VYGGADALIVL-RVLMGLGEGTTFPALSVLLASWVPANERGMLGALVLGGGQMGSIAGNIISGYV 203
            .|  :..|:|. |||.|:|.......|.|:.:.|.|..|.....|::....|..::....|||.:
 Worm   140 TY--SFYLVVFCRVLQGIGISVILTVLGVIPSYWSPKTEYSTYLAILSCAWQFSNVIFMPISGIL 202

  Fly   204 L-SSMDWPWVFYVFAIIALVWFVVFTLVCFSSPFTHPYIKPEERAFLAQEVPPPDKNKPKTPFFA 267
            . ||..|..::|||.:....::.||.:.....|..|..:..:|   |.|.|    :.||:   ..
 Worm   203 CDSSFGWRSIYYVFGVATGFFYFVFFMFYTDIPGIHKNVSEKE---LGQIV----EGKPE---HT 257

  Fly   268 ILTSIPMW------ALISAQI---GHDWGFYIMVSYLPKYMSDVLRFSIKSNGLYSSLPYVTMWI 323
            :..::|.|      .::||.:   |.:.||..::.|.|.|:.:||:|.::|.|..::|||....|
 Worm   258 VREAVPYWKICTDRCVLSAWVSFLGGNLGFITLLLYGPTYLREVLQFDVRSTGYINALPYALCAI 322

  Fly   324 MSLLSGCVADQMIKRNCMSTTNTRKIMTGVAAFGPAVFMVAASYAGCNRGMVVALFT-------- 380
            ....:|.::|:      ::..:.:.|.|         |.:.:|..|...|.::..:|        
 Worm   323 YKFGAGKISDR------VTFASDKAIYT---------FWLFSSIIGLGIGYIIMAWTSDRNVAFV 372

  Fly   381 ------ITMGLMGTYYAGMKLTPLDMSPNYAGTLMAITNGIGAITGVVSPYLVGVMTPNATLLEW 439
                  :|.||:  ..|.:|...:....:....:.|| :.:......:||..||::.|:.|..:|
 Worm   373 AFAFAVVTSGLI--IMACVKCLAMRCQQHCHFAVSAI-SFLSYCVQFISPLGVGILCPDNTPDQW 434

  Fly   440 RLVFWVAFGVLVVTAIVYCIWASGDVQPF-----NDGTNSNKKKD 479
            ..:|.:...::::|.           .||     ....|..|:||
 Worm   435 SRLFIIITLIMIITN-----------APFPWLTTQQAANYTKRKD 468

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG9254NP_609664.1 2A0114euk 28..466 CDD:129972 101/467 (22%)
MFS 82..461 CDD:119392 90/405 (22%)
Y19D10A.4NP_503657.2 MFS 89..>332 CDD:391944 65/254 (26%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C160160226
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG2532
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
32.740

Return to query results.
Submit another query.