DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG9254 and vglu-3

DIOPT Version :9

Sequence 1:NP_609664.1 Gene:CG9254 / 34773 FlyBaseID:FBgn0028513 Length:481 Species:Drosophila melanogaster
Sequence 2:NP_499277.1 Gene:vglu-3 / 176442 WormBaseID:WBGene00011556 Length:544 Species:Caenorhabditis elegans


Alignment Length:483 Identity:138/483 - (28%)
Similarity:227/483 - (46%) Gaps:52/483 - (10%)


- Green bases have known domain annotations that are detailed below.


  Fly     5 KEQPEWGIKLSKFFVLPQRWILAIMGFFAIFNAYTMRICLSQAITVLVVKRNYTIFHTEAICEPD 69
            |||.:...:..|||:...||.:||:..|....::.:|.....|...:|  .|:    |:|..|..
 Worm    29 KEQLQTITEQKKFFLRKVRWQIAILAHFGFAISFGIRSNFGVAKNRMV--NNF----TDAYGEVH 87

  Fly    70 DQSDPSSTFEGGDYDWSQEKQGLILASFYIGYIVTHLPGGILADKFGGKWTLSLGIFFTAIFTLL 134
            ::          ::.|:..:.|::.:||:.||..:.:|.|:||.||.......|||...:...:|
 Worm    88 ER----------EFLWTGAEVGMMESSFFYGYAASQIPAGVLAAKFAPNKIFMLGILVASFMNIL 142

  Fly   135 T-------PVCIVYGGADALIVLRVLMGLGEGTTFPALSVLLASWVPANERGMLGALVLGGGQMG 192
            :       |...::     ::|::.:.||..|..:||:..:...|.|..||..|......|..:|
 Worm   143 SAISFNFHPYTDIF-----VMVVQAVQGLALGVLYPAMHGVWKFWAPPLERSKLATTAFTGSSVG 202

  Fly   193 SIAGNIISGYVLSSMDWPWVFYVFAIIALVWFVVFTLVCFSSPFTHPYIKPEERAFLAQEV-PPP 256
            .:.|...|.|::|...|...||||.::.::|.:::..|...||.||.||..:|:..:.::: ...
 Worm   203 VMTGLPASAYLVSHFSWSTPFYVFGVVGIIWSLIWMYVSSHSPETHGYISDDEKKQVTEKIGDVA 267

  Fly   257 DKNKPKT--PFFAILTSIPMWALISAQIGHDWGFYIMVSYLPKYMSDVLRFSIKSNGLYSSLPYV 319
            .||...|  |:..::||..:||:|.......|||::::.....||.|||...||::|..|..|..
 Worm   268 VKNMSLTTLPWRDMMTSSAVWAIIICTFCRSWGFFLLLGNQLTYMKDVLHIDIKNSGFISIFPQF 332

  Fly   320 TMWIMSLLSGCVADQMIKRNCMSTTNTRKIMTGVAAFGPAVFMVAASYAGC---NRGMVVALFTI 381
            .|.|::|.:|.:.|.:.....|||...||   .|..||   |.|.|...||   .|..|:|:..:
 Worm   333 GMCIVTLATGQLCDYLRSSGKMSTEAVRK---SVNTFG---FTVEAMMLGCLAFVRDPVIAVTCL 391

  Fly   382 TMGL--MGTYYAGMKLTPLDMSPNYAGTLMAITNGIGAITGVVSPYLVGVMTPNATLLE----WR 440
            .:..  .|:..:|..:...|::|.||..||.|.||:||:.|      ||.|..|....:    |:
 Worm   392 VIACTGSGSVLSGFNVNHFDIAPRYAPILMGIANGLGAVAG------VGGMVTNTVTYQNPDGWK 450

  Fly   441 LVFWVAFGVLVVTAIVYCIWASGDVQPF 468
            .||.:|..:.:...|.:.|:|.|||.|:
 Worm   451 WVFLLAMAIDIFGVIFFLIFAKGDVLPW 478

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG9254NP_609664.1 2A0114euk 28..466 CDD:129972 127/456 (28%)
MFS 82..461 CDD:119392 115/397 (29%)
vglu-3NP_499277.1 2A0114euk 47..485 CDD:129972 132/465 (28%)
MFS 52..471 CDD:119392 124/451 (27%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C160160211
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG2532
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 1 1.000 - - FOG0000034
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
54.740

Return to query results.
Submit another query.