DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG9254 and slc-17.6

DIOPT Version :9

Sequence 1:NP_609664.1 Gene:CG9254 / 34773 FlyBaseID:FBgn0028513 Length:481 Species:Drosophila melanogaster
Sequence 2:NP_490947.2 Gene:slc-17.6 / 171781 WormBaseID:WBGene00017398 Length:546 Species:Caenorhabditis elegans


Alignment Length:482 Identity:128/482 - (26%)
Similarity:223/482 - (46%) Gaps:47/482 - (9%)


- Green bases have known domain annotations that are detailed below.


  Fly     8 PEWGIKLSKFFVLPQRWILAIMGFFAIFNAYTMRICLSQAITVLVVKRNYTIFHTEAICEPDDQS 72
            |.|.::..:|     :..|.|.....:|.  .||.|...|:..:|...|.| ||.:...|     
 Worm    18 PLWTLQSIRF-----QTALLISAACVVFG--LMRTCFGMAMVDIVRSGNGT-FHPDLHME----- 69

  Fly    73 DPSSTFEGGDYDWSQEKQGLILASFYIGYIVTHLPGGILADKFGGKWTLSLGIFFTAIFTLLTPV 137
                        ||.::|..|..|||||..:...|...||.|.|.|..||..:......:||||.
 Worm    70 ------------WSGDEQANIHTSFYIGAFIAVFPSEFLAKKLGPKNLLSFALLLNIFGSLLTPF 122

  Fly   138 CIVY-GGADALIVLRVLMGLGEGTTFPALSVLLASWVPANERGMLGALVLGGGQMGSIAGNIISG 201
            ..:| .....:..:|::||.|.|...||.|||::||.|.:|:....|:...|.|:| ||   :|.
 Worm   123 SAIYLRSYFPVAAIRLIMGFGYGFVIPAGSVLISSWFPLSEKSTAMAIFTTGNQIG-IA---VSM 183

  Fly   202 YVLSSM-------DWPWVFYVFAIIALVWFVVFTLVCFSSPFTHPYIKPEERAFLAQEVPPPDKN 259
            ::.:.:       .||.||.|:.:|..|:.|::.:.....|....||...|..::  :.....:|
 Worm   184 FLTAKLCQLHFFEGWPLVFIVYGLIGAVFLVIWHVRLADKPRESKYITATELTYI--KGGKQRRN 246

  Fly   260 KPK-----TPFFAILTSIPMWALISAQIGHDWGFYIMVSYLPKYMSDVLRFSIKSNGLYSSLPYV 319
            :.:     ||:..|:.:..:.|:.:......:....:|:|||||.....:.::..||::||||:.
 Worm   247 RAETIVRATPYMKIILNGCVCAICACSFAQSFVLVALVTYLPKYNQIAFKMNLTHNGIWSSLPFF 311

  Fly   320 TMWIMSLLSGCVADQMIKRNCMSTTNTRKIMTGVAAFGPAVFMVAASYAGCNRGMVVAL-FTITM 383
            ...|..||...:||: :|:..::.|...|:...:|:|..|:|:|.|:|...:...:|.| ..::|
 Worm   312 IQMITKLLFAIIADK-VKQRKVNATAVTKVSNAIASFASAIFIVIAAYGPFDSAELVQLSIIVSM 375

  Fly   384 GLMGTYYAGMKLTPLDMSPNYAGTLMAITNGIGAITGVVSPYLVGVMTPNATLLEWRLVFWVAFG 448
            .....|..|...:.:.::|.:...:.:.......|...::|.::|.:|.:.|:.||:..|:...|
 Worm   376 AAFSAYVPGYNTSIVTVAPQFTAFISSYAQLYAQIASTLAPIVIGRITSHGTIYEWKCAFYSLAG 440

  Fly   449 VLVVTAIVYCIWASGDVQPFNDGTNSN 475
            ||.||.:::.|:..|..:|:.: |.||
 Worm   441 VLAVTGLIFQIFGHGRTEPWGE-TPSN 466

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG9254NP_609664.1 2A0114euk 28..466 CDD:129972 120/451 (27%)
MFS 82..461 CDD:119392 107/392 (27%)
slc-17.6NP_490947.2 MFS 30..453 CDD:391944 120/449 (27%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 1 1.010 - - QHG28615
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 1 1.000 - - FOG0000034
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR11662
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X142
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
55.020

Return to query results.
Submit another query.