DRSC/TRiP Functional Genomics Resources

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Protein Alignment Hsp60D and groL

DIOPT Version :10

Sequence 1:NP_609656.1 Gene:Hsp60D / 34763 FlyBaseID:FBgn0032525 Length:558 Species:Drosophila melanogaster
Sequence 2:NP_418567.1 Gene:groL / 948665 ECOCYCID:EG10599 Length:548 Species:Escherichia coli


Alignment Length:546 Identity:204/546 - (37%)
Similarity:323/546 - (59%) Gaps:14/546 - (2%)


- Green bases have known domain annotations that are detailed below.


  Fly    17 ANDIRFGAEARCLLMQGVNVLANAVATTLGPKGRNVLIEQLLISPRITKDGITVANNVQLGNRRQ 81
            |.|::||.:||..:::||||||:||..|||||||||::::...:|.|||||::||..::|.::.:
E. coli     3 AKDVKFGNDARVKMLRGVNVLADAVKVTLGPKGRNVVLDKSFGAPTITKDGVSVAREIELEDKFE 67

  Fly    82 DMGVQLLRQATNNTNNKVGDGTTTATILARGIACQGMHVLRQSKVNVQLLREGILEGSRAVCDAL 146
            :||.|::::..:..|:..||||||||:||:.|..:|:..: .:.:|...|:.||.:...|..:.|
E. coli    68 NMGAQMVKEVASKANDAAGDGTTTATVLAQAIITEGLKAV-AAGMNPMDLKRGIDKAVTAAVEEL 131

  Fly   147 GEMSQSVDTIGQVEAVAKVALNGDERLAELIGDIILELGDSGVILLKESHSPFDEAKIQEGITIA 211
            ..:|........:..|..::.|.||.:.:||.:.:.::|..|||.:::.....||..:.||:...
E. coli   132 KALSVPCSDSKAIAQVGTISANSDETVGKLIAEAMDKVGKEGVITVEDGTGLQDELDVVEGMQFD 196

  Fly   212 SGYYSPFFAKQSHT--LELENCLLLLTLAKIDQVEQILPALELARLKERPLLIIAKNFGSDLLKI 274
            .||.||:|..:..|  :|||:..:||...||..:.::||.||......:||||||::...:.|..
E. coli   197 RGYLSPYFINKPETGAVELESPFILLADKKISNIREMLPVLEAVAKAGKPLLIIAEDVEGEALAT 261

  Fly   275 LVLNNLQGRVQVCAVKAPSFGDEQCEEMEDIAFATGGHLL--EDASSLADLSEEDLGEVMEAVVD 337
            ||:|.::|.|:|.|||||.|||.:...::|||..|||.::  |....|...:.||||:....|::
E. coli   262 LVVNTMRGIVKVAAVKAPGFGDRRKAMLQDIATLTGGTVISEEIGMELEKATLEDLGQAKRVVIN 326

  Fly   338 AKETHLLQPINVNEEQVQCRIQDIRELIDEAFTDVELDRLKTRLGRLQGHLATIFVGGTSELEVS 402
            ...|.::..:. .|..:|.|:..||:.|:||.:|.:.::|:.|:.:|.|.:|.|.||..:|:|:.
E. coli   327 KDTTTIIDGVG-EEAAIQGRVAQIRQQIEEATSDYDREKLQERVAKLAGGVAVIKVGAATEVEMK 390

  Fly   403 ERKDRFNDALHAVRVAISDGVVPGGGTAYLRCIPVLDELPPTDIMELQVGREIVKDALRLPCYTI 467
            |:|.|..|||||.|.|:.:|||.|||.|.:|....|.:|...: .:..||.::...|:..|...|
E. coli   391 EKKARVEDALHATRAAVEEGVVAGGGVALIRVASKLADLRGQN-EDQNVGIKVALRAMEAPLRQI 454

  Fly   468 ARNAGVDPNEVLRRVLKGSGNYGYDAAAGEFGDLVVRGIVDPTKVLQSAMTSAAGIASLLATTEV 532
            ..|.|.:|:.|...|..|.|||||:||..|:|:::..||:|||||.:||:..||.:|.|:.|||.
E. coli   455 VLNCGEEPSVVANTVKGGDGNYGYNAATEEYGNMIDMGILDPTKVTRSALQYAASVAGLMITTEC 519

  Fly   533 LITKQPTKPKIPKNQVTKDLAKLVGM 558
            ::|      .:|||... ||....||
E. coli   520 MVT------DLPKNDAA-DLGAAGGM 538

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Hsp60DNP_609656.1 GroEL 18..536 CDD:239460 195/521 (37%)
groLNP_418567.1 groEL 2..530 CDD:234573 200/535 (37%)

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