DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Hsp60D and TCM62

DIOPT Version :9

Sequence 1:NP_609656.1 Gene:Hsp60D / 34763 FlyBaseID:FBgn0032525 Length:558 Species:Drosophila melanogaster
Sequence 2:NP_009600.2 Gene:TCM62 / 852332 SGDID:S000000248 Length:572 Species:Saccharomyces cerevisiae


Alignment Length:550 Identity:109/550 - (19%)
Similarity:211/550 - (38%) Gaps:116/550 - (21%)


- Green bases have known domain annotations that are detailed below.


  Fly    51 NVLIEQLLISPRITKDGITV--ANNVQLGNRRQ----DMGVQLLRQATNNTNNKVGDGTTTATIL 109
            ||:.|.|        |.:.|  |.|.:|.:.|.    .:|:||......:        ..|||  
Yeast    80 NVMRELL--------DSLQVDEATNTRLQSNRPRKLGRVGLQLFMDCIQD--------NLTAT-- 126

  Fly   110 ARGIACQGM-HVLRQSKVNVQLLREGILEGSRAVCDALGEMSQSVDTIGQVEAVAK---VALNGD 170
            :..:.|..: |..:..:..|   ..||..|.|.:.|.|.:....|.:...|:|:.:   ::.:..
Yeast   127 STSLTCSLLEHYFKYPEKEV---TNGIKAGLRYIRDFLAKNKIIVKSQNDVDALVEQLTMSSSDS 188

  Fly   171 ERLAELIGDIILELGDSGVILLKESHSPFDEAKIQEGITIASGYYSPFFAKQSHTLELE------ 229
            :.:..::..|..||....::.:...:..:||..:.:|....:|...   :.:::...||      
Yeast   189 QSIKRVLKAINYELFSDDIVRVINGNKTYDEVDVSKGWKYPAGILD---SNEAYLRSLELPTKKL 250

  Fly   230 -----NCLLLLTLAKIDQVEQILPALELAR-LKERPLLIIAKNFGSDLLKILVLNNLQGR----- 283
                 :.|:|:....:....:|||.:..|| |::..|||:..:...|.|..:.:||.:.:     
Yeast   251 VSIDKDMLVLMYDGTLRDANKILPTITYARKLRKSVLLIVNGDCTGDALTSVTINNNRNKRENNE 315

  Fly   284 VQVCAVKAPSFGDEQCEEMEDIAFATGGHLLEDASSLADLSEEDLGEVMEAVVDAKETHLLQPIN 348
            .::..:|.....:......|::.|.....|.....|                :.:.|...|.|..
Yeast   316 SRIVVLKYSKKANNDLAPQENLDFIKFLRLPCGYDS----------------IYSPEYSPLVPSK 364

  Fly   349 VNEEQVQCRIQDIRELIDEAF--TDVELDRLKTRLGR--LQGHLATIFVGGTSELEVSERKDRFN 409
            :..::....|:.|:....|||  ..::.:.:..::.:  || :..|:.:||.:|:|:..|::..:
Yeast   365 MCADKYYGSIESIKATTGEAFLYNSIDAEAIPNKVPKSFLQ-NTVTLSIGGHNEIEIDRRRNAID 428

  Fly   410 DALHAVRV-AISDGVVPGGGTAYLRCIPVLDELPPTD-IMELQVGREIVKDALRLPCYTIARNAG 472
            :.|:.|.. .::.|.:||.|.:.|:.||.|:||...: ....:||...|..|:.||.....:|| 
Yeast   429 NCLNNVLCHGLAKGFIPGYGISLLKAIPGLNELKANEPNFMTKVGINAVLSAVILPSEVAFKNA- 492

  Fly   473 VDPNEVLRRVLKGSGNYGYD------AAAGEFGD----------------LVVRGIVDPTKVLQS 515
                            |||:      ..||...:                .|..|.::|...:.|
Yeast   493 ----------------YGYNYYEINSLIAGAINEKSFPMAKFSPNSEPVNTVKDGNLEPWSKMDS 541

  Fly   516 AMTSAAGIASLLATTEVLIT---KQPTKPK 542
            .:........||.:...:||   |:|.:.|
Yeast   542 CLAGVETFIELLTSCNTIITCVYKKPERHK 571

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Hsp60DNP_609656.1 PTZ00114 13..546 CDD:185455 108/549 (20%)
GroEL 18..536 CDD:239460 106/542 (20%)
TCM62NP_009600.2 PTZ00114 124..492 CDD:185455 78/392 (20%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG0459
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR45633
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
32.910

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