DRSC/TRiP Functional Genomics Resources

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Protein Alignment Hsp60D and AT1G67760

DIOPT Version :10

Sequence 1:NP_609656.1 Gene:Hsp60D / 34763 FlyBaseID:FBgn0032525 Length:558 Species:Drosophila melanogaster
Sequence 2:NP_176942.2 Gene:AT1G67760 / 843101 AraportID:AT1G67760 Length:120 Species:Arabidopsis thaliana


Alignment Length:117 Identity:29/117 - (24%)
Similarity:48/117 - (41%) Gaps:16/117 - (13%)


- Green bases have known domain annotations that are detailed below.


  Fly   149 MSQSVDTIGQV-----EAVAKVALNG-DERLAELIGDIILELGDSGVILLKESHSPFD-EAKIQE 206
            |:.:.|..|:.     |...|..|.| |.:.|.      :..|.:...:|:.|..|.. |.|..:
plant     1 MALAFDEFGRPFIILREQDQKTRLKGIDAQKAN------ISAGKAVARILRSSLGPKGMEKKCFK 59

  Fly   207 GITIASGYYSPFFAKQSHTLELENCLLLLTLAKIDQVEQILPALELARLKER 258
            .:|..|.|.|.|..   :.:.|.:..:.|.|....|..:.|.|::..::|||
plant    60 DLTEMSPYVSFFLL---NLISLRSIPMALALNSGLQPIETLSAVKSQQIKER 108

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Hsp60DNP_609656.1 GroEL 18..536 CDD:239460 29/117 (25%)
AT1G67760NP_176942.2 chaperonin_like 2..>55 CDD:351886 12/58 (21%)
chaperonin_like <78..107 CDD:351886 6/28 (21%)

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