DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Hsp60D and Cpn60beta4

DIOPT Version :9

Sequence 1:NP_609656.1 Gene:Hsp60D / 34763 FlyBaseID:FBgn0032525 Length:558 Species:Drosophila melanogaster
Sequence 2:NP_173947.1 Gene:Cpn60beta4 / 839164 AraportID:AT1G26230 Length:611 Species:Arabidopsis thaliana


Alignment Length:539 Identity:174/539 - (32%)
Similarity:301/539 - (55%) Gaps:12/539 - (2%)


- Green bases have known domain annotations that are detailed below.


  Fly    13 VRTFANDIRFGAEARCL--LMQGVNVLANAVATTLGPKGRNVLIEQLLISPRITKDGITVANNVQ 75
            ||..|.::.|..:....  |..|.:::|..:..|||||||||:::.....|||..||.||...::
plant    36 VRAAAKEVHFNRDGSVTKKLQAGADMVAKLLGVTLGPKGRNVVLQNKYGPPRIVNDGETVLKEIE 100

  Fly    76 LGNRRQDMGVQLLRQATNNTNNKVGDGTTTATILARGIACQGMHVLRQSKVNVQLLREGILEGSR 140
            |.:..:::||:|:|||...||:..|||:||:.|||.|:..:|:.|:......:|:.| ||.:.::
plant   101 LEDPLENVGVKLVRQAGAKTNDLAGDGSTTSIILAHGLITEGIKVISAGTNPIQVAR-GIEKTTK 164

  Fly   141 AVCDALGEMSQSVDTIGQVEAVAKVALNGDERLAELIGDIILELGDSGVILLKESHSPFDEAKIQ 205
            |:...|..||:.::. .::..||.|:...|..:..:|.:...::|.:||:.:::.....:..:|.
plant   165 ALVLELKSMSREIED-HELAHVAAVSAGNDYEVGNMISNAFQQVGRTGVVTIEKGKYLVNNLEIV 228

  Fly   206 EGITIASGYYSPFFA--KQSHTLELENCLLLLTLAKIDQVEQILPALELARLKERPLLIIAKNFG 268
            ||:....||.||:|.  ::....|..:|.|||...||...:.:...|:.|..:|.|:||:|::..
plant   229 EGMQFNRGYLSPYFVTDRRKREAEFHDCKLLLVDKKITNPKDMFKILDSAVKEEFPVLIVAEDIE 293

  Fly   269 SDLLKILVLNNLQGRVQVCAVKAPSFGDEQCEEMEDIAFATGGHLLED--ASSLADLSEEDLGEV 331
            .|.|..::.|.|:|.::|.|:|||:||:.:...::|:|..||..::.|  ..||....:|.||..
plant   294 QDALAPVIRNKLKGNLKVAAIKAPAFGERKSHCLDDLAIFTGATVIRDEMGLSLEKAGKEVLGTA 358

  Fly   332 MEAVVDAKETHLLQPINVNEEQVQCRIQDIRELIDEAFTDVELDRLKTRLGRLQGHLATIFVGGT 396
            ...:| .|::.|:......::.|..|:..|:.||:....:.:...|..|:.||.|.:|.|.||..
plant   359 KRVLV-TKDSTLIVTNGFTQKAVDERVSQIKNLIENTEENFQKKILNERVARLSGGIAIIQVGAL 422

  Fly   397 SELEVSERKDRFNDALHAVRVAISDGVVPGGGTAYLRCIPVLDELPPT-DIMELQVGREIVKDAL 460
            :::|:.:::.:..|||:|.:.||.:|:|.|||.|.||....:|.:..| |..|.::|.||.|.||
plant   423 TQVELKDKQLKVEDALNATKSAIEEGIVVGGGCALLRLATKVDRIKETLDNTEQKIGAEIFKKAL 487

  Fly   461 RLPCYTIARNAGVDPNEVLRRVLKGSGN-YGYDAAAGEFGDLVVRGIVDPTKVLQSAMTSAAGIA 524
            ..|...||:||..:.|.|:.:||..... |||:||..::.||::.||:|||||::..:..|:.:|
plant   488 SYPIRLIAKNADTNGNIVIEKVLSNKNTMYGYNAAKNQYEDLMLAGIIDPTKVVRCCLEHASSVA 552

  Fly   525 SLLATTE-VLITKQPTKPK 542
            ....|:: |::..:..||:
plant   553 QTFLTSDCVVVEIKEIKPR 571

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Hsp60DNP_609656.1 PTZ00114 13..546 CDD:185455 174/539 (32%)
GroEL 18..536 CDD:239460 169/526 (32%)
Cpn60beta4NP_173947.1 chaperonin_like 1..576 CDD:295468 174/539 (32%)
PTZ00114 35..570 CDD:185455 172/536 (32%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG0459
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D415781at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR45633
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 1 0.960 - -
54.880

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