DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Hsp60D and Cpn60beta3

DIOPT Version :9

Sequence 1:NP_609656.1 Gene:Hsp60D / 34763 FlyBaseID:FBgn0032525 Length:558 Species:Drosophila melanogaster
Sequence 2:NP_001032083.1 Gene:Cpn60beta3 / 835751 AraportID:AT5G56500 Length:597 Species:Arabidopsis thaliana


Alignment Length:534 Identity:195/534 - (36%)
Similarity:306/534 - (57%) Gaps:17/534 - (3%)


- Green bases have known domain annotations that are detailed below.


  Fly    17 ANDIRFGAEARCL--LMQGVNVLANAVATTLGPKGRNVLIEQLLISPRITKDGITVANNVQLGNR 79
            |..:.|..:...:  |..|||.||:.|..|||||||||::|....||||..||:|||..|:|.:.
plant    52 AKQLHFNKDGTAIKKLQAGVNKLADLVGVTLGPKGRNVVLESKYGSPRIVNDGVTVAREVELEDP 116

  Fly    80 RQDMGVQLLRQATNNTNNKVGDGTTTATILARGIACQGMHVLRQSKVNVQLLREGILEGSRAVCD 144
            .:::|.:|:|||.:.||:..||||||:.:||:|:..:|:.|: .:..|..|:..||.:.::|:..
plant   117 VENIGAKLVRQAASKTNDLAGDGTTTSVVLAQGLIAEGVKVV-AAGANPVLITRGIEKTTKALVA 180

  Fly   145 ALGEMSQSVDTIGQVEAVAKVALNGDERLAELIGDIILELGDSGVILLKESHSPFDEAKIQEGIT 209
            .|.:||:.|:. .::..||.|:...:..:..:|.:.:.::|..||:.|:|..|..:...:.||:.
plant   181 ELKKMSKEVED-SELADVAAVSAGNNYEVGNMIAEAMAKVGRKGVVTLEEGKSAENSLYVVEGMQ 244

  Fly   210 IASGYYSPFFAKQSHTL--ELENCLLLLTLAKIDQVEQILPALELARLKERPLLIIAKNFGSDLL 272
            ...||.||:|...|..:  |.|||.|.|...||.....|:..||.|.....||||||::...:.|
plant   245 FDRGYISPYFVTDSEKMCAEYENCKLFLVDKKITNARDIISILEDAIKGGYPLLIIAEDIEQEPL 309

  Fly   273 KILVLNNLQGRVQVCAVKAPSFGDEQCEEMEDIAFATGGHLL--EDASSLADLSEEDLGEVMEAV 335
            ..||:|.|:|.::|.|:|||.||:.:.:.::|||..||..::  |....|..:..|.||...:.|
plant   310 ATLVVNKLRGTIKVAALKAPGFGERKSQYLDDIAALTGATVIREEVGLQLEKVGPEVLGNAGKVV 374

  Fly   336 VDAKETHLLQPINVNEEQVQCRIQDIRELIDEAFTDVELDRLKTRLGRLQGHLATIFVGGTSELE 400
            : .|:|..:......||.|:.|::.|:.||:.|..|.|.::|..|:.:|.|.:|.|.||..:|.|
plant   375 L-TKDTTTIVGDGSTEEVVKKRVEQIKNLIEAAEQDYEKEKLNERIAKLSGGVAVIQVGAQTETE 438

  Fly   401 VSERKDRFNDALHAVRVAISDGVVPGGGTAYLRCIPVLDELPPT---DIMELQVGREIVKDALRL 462
            :.|:|.|..|||:|.:.|:.:|:|.|||...||....:|.:..|   |  |.:||.:|||.||..
plant   439 LKEKKLRVEDALNATKAAVEEGIVVGGGCTLLRLASKVDAIKETLAND--EEKVGADIVKKALSY 501

  Fly   463 PCYTIARNAGVDPNEVLRRVLKGSG-NYGYDAAAGEFGDLVVRGIVDPTKVLQSAMTSAAGIAS- 525
            |...||:||||:.:.|..:||.... .:||:||.|::.||:..||:|||||::..:..|:.:|. 
plant   502 PLKLIAKNAGVNGSVVSEKVLSSDNPKHGYNAATGKYEDLMAAGIIDPTKVVRCCLEHASSVAKT 566

  Fly   526 -LLATTEVLITKQP 538
             |::...|:..|:|
plant   567 FLMSDCVVVEIKEP 580

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Hsp60DNP_609656.1 PTZ00114 13..546 CDD:185455 195/534 (37%)
GroEL 18..536 CDD:239460 192/529 (36%)
Cpn60beta3NP_001032083.1 PLN03167 1..597 CDD:215611 195/534 (37%)
groEL 51..597 CDD:237231 195/534 (37%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG0459
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D415781at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR45633
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 1 0.960 - -
54.880

Return to query results.
Submit another query.