DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Hsp60D and HSP60-3A

DIOPT Version :9

Sequence 1:NP_609656.1 Gene:Hsp60D / 34763 FlyBaseID:FBgn0032525 Length:558 Species:Drosophila melanogaster
Sequence 2:NP_566466.1 Gene:HSP60-3A / 820599 AraportID:AT3G13860 Length:572 Species:Arabidopsis thaliana


Alignment Length:549 Identity:208/549 - (37%)
Similarity:326/549 - (59%) Gaps:16/549 - (2%)


- Green bases have known domain annotations that are detailed below.


  Fly    17 ANDIRFGAEARCLLMQGVNVLANAVATTLGPKGRNVLIEQLLISPRITKDGITVANNVQLGNRRQ 81
            |.||.||..||..::|||:.:|.||..|:|||||||:||.....|:|||||:|||.::....:.:
plant    33 AKDISFGIGARAAMLQGVSEVAEAVKVTMGPKGRNVIIESSYGGPKITKDGVTVAKSISFQAKAK 97

  Fly    82 DMGVQLLRQATNNTNNKVGDGTTTATILARGIACQGMHVLRQSKVNVQLLREGILEGSRAVCDAL 146
            ::|.:|::|..:.||...|||||.||:|.:.|..:|...: .:.|||..||.||.....||...|
plant    98 NIGAELVKQVASATNKVAGDGTTCATVLTQAILIEGCKSV-AAGVNVMDLRVGINMAIAAVVSDL 161

  Fly   147 GEMSQSVDTIGQVEAVAKVALNGDERLAELIGDIILELGDSGVILLKESHSPFDEAKIQEGITIA 211
            ...:..:.|..::..||.::.||:..:.|||...:.::|..|||.:.:.::..:|.::.||:.:|
plant   162 KSRAVMISTPEEITQVATISANGEREIGELIARAMEKVGKEGVITVADGNTLDNELEVVEGMKLA 226

  Fly   212 SGYYSPFFAKQSHT--LELENCLLLLTLAKIDQVEQILPALELARLKERPLLIIAKNFGSDLLKI 274
            .||.||:|.....|  .||||.::|:...||..:..:|..||.|....|||||:|::..||.|.:
plant   227 RGYISPYFITDEKTQKCELENPIILIHEKKISDINSLLKVLEAAVKSSRPLLIVAEDVESDALAM 291

  Fly   275 LVLNNLQGRVQVCAVKAPSFGDEQCEEMEDIAFATGGHLL--EDASSLADLSEEDLGEVMEAVVD 337
            |:||...|.::|||:|||.|||.:...::|:|..||..::  |...||..:..|.||...:..|.
plant   292 LILNKHHGGLKVCAIKAPGFGDNRKASLDDLAVLTGAEVISEERGLSLEKIRPELLGTAKKVTVT 356

  Fly   338 AKETHLLQPINVNEEQVQCRIQDIRELIDEAFTDVELDRLKTRLGRLQGHLATIFVGGTSELEVS 402
            ..:|.:|.. ..:::.::.|.:::|...:::.:..:.::.:.||.:|.|.:|...|||.||.||.
plant   357 RDDTIILHG-GGDKKLIEERCEELRSANEKSTSTFDQEKTQERLSKLSGGVAVFKVGGASESEVG 420

  Fly   403 ERKDRFNDALHAVRVAISDGVVPGGGTAYLRCIPVLDELPPTDIMELQVGREIVKDALRLPCYTI 467
            |||||..|||:|.|.|:.:|::||||.|.|.....||.| .|:..:.:.|.:||::||:.|.:||
plant   421 ERKDRVTDALNATRAAVEEGIIPGGGVALLYATKALDNL-QTENEDQRRGVQIVQNALKAPAFTI 484

  Fly   468 ARNAGVDPNEVLRRVLKGSG-NYGYDAAAGEFGDLVVRGIVDPTKVLQSAMTSAAGIASLLATTE 531
            |.|||.|.:.|:.::|:... |:|:|||.|::.|:|..||:||.||:::|:|.||.::.||.|||
plant   485 AANAGYDGSLVVGKLLEQDDCNFGFDAAKGKYVDMVKAGIIDPVKVIRTALTDAASVSLLLTTTE 549

  Fly   532 --VLITKQPTKPKIPKNQVTKDLAKLVGM 558
              ||:......|    |.| .|:|.: ||
plant   550 ASVLVKADENTP----NHV-PDMASM-GM 572

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Hsp60DNP_609656.1 PTZ00114 13..546 CDD:185455 202/535 (38%)
GroEL 18..536 CDD:239460 200/524 (38%)
HSP60-3ANP_566466.1 PTZ00114 20..570 CDD:185455 206/544 (38%)
GroEL 34..552 CDD:239460 198/520 (38%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG0459
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D415781at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR45633
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 1 0.960 - -
65.880

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