DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Hsp60D and Cpn60beta2

DIOPT Version :9

Sequence 1:NP_609656.1 Gene:Hsp60D / 34763 FlyBaseID:FBgn0032525 Length:558 Species:Drosophila melanogaster
Sequence 2:NP_187956.1 Gene:Cpn60beta2 / 820549 AraportID:AT3G13470 Length:596 Species:Arabidopsis thaliana


Alignment Length:546 Identity:193/546 - (35%)
Similarity:309/546 - (56%) Gaps:11/546 - (2%)


- Green bases have known domain annotations that are detailed below.


  Fly     7 RSGRAGVRTFANDIRFGAEARCL--LMQGVNVLANAVATTLGPKGRNVLIEQLLISPRITKDGIT 69
            |..|..:...|.::.|..:...:  |..|||.||:.|..|||||||||::|....||||..||:|
plant    42 RRSRPAIVCAAKELHFNKDGTTIRKLQTGVNKLADLVGVTLGPKGRNVVLESKYGSPRIVNDGVT 106

  Fly    70 VANNVQLGNRRQDMGVQLLRQATNNTNNKVGDGTTTATILARGIACQGMHVLRQSKVNVQLLREG 134
            ||..|:|.:..:::|.:|:|||...||:..||||||:.:||:|...:|:.|: .:..|..|:..|
plant   107 VAREVELEDPVENIGAKLVRQAAAKTNDLAGDGTTTSVVLAQGFIAEGVKVV-AAGANPVLITRG 170

  Fly   135 ILEGSRAVCDALGEMSQSVDTIGQVEAVAKVALNGDERLAELIGDIILELGDSGVILLKESHSPF 199
            |.:.::|:.:.|..||:.|:. .::..||.|:...:..:..:|.:.:.::|..||:.|:|..|..
plant   171 IEKTAKALVNELKLMSKEVED-SELADVAAVSAGNNHEVGSMIAEAMSKVGRKGVVTLEEGKSAE 234

  Fly   200 DEAKIQEGITIASGYYSPFFAKQSH--TLELENCLLLLTLAKIDQVEQILPALELARLKERPLLI 262
            :...:.||:....||.||:|...|.  ::|.:||.|||...|:.....::..||.|.....|:||
plant   235 NNLYVVEGMQFDRGYISPYFVTDSEKMSVEYDNCKLLLVDKKVTNARDLVGVLEDAIRGGYPILI 299

  Fly   263 IAKNFGSDLLKILVLNNLQGRVQVCAVKAPSFGDEQCEEMEDIAFATGGHLL--EDASSLADLSE 325
            ||::...:.|..||:|.|:|.:::.|:|||.||:.:.:.::|||..||..::  |...||....:
plant   300 IAEDIEQEALATLVVNKLRGTLKIAALKAPGFGERKSQYLDDIAILTGATVIREEVGLSLDKAGK 364

  Fly   326 EDLGEVMEAVVDAKETHLLQPINVNEEQVQCRIQDIRELIDEAFTDVELDRLKTRLGRLQGHLAT 390
            |.||...:.|: .||...:......:|.|..|:..||.||::|..|.|.::|..|:.:|.|.:|.
plant   365 EVLGNASKVVL-TKEMTTIVGDGTTQEAVNKRVVQIRNLIEQAEQDYEKEKLNERIAKLSGGVAV 428

  Fly   391 IFVGGTSELEVSERKDRFNDALHAVRVAISDGVVPGGGTAYLRCIPVLDELPPT-DIMELQVGRE 454
            |.||..:|.|:.|:|.|..|||:|.:.|:.:|:|.|||...||....:|.:..| :..|.:||.|
plant   429 IQVGAQTETELKEKKLRVEDALNATKAAVEEGIVVGGGCTLLRLASKVDAIKDTLENDEEKVGAE 493

  Fly   455 IVKDALRLPCYTIARNAGVDPNEVLRRVLKGSG-NYGYDAAAGEFGDLVVRGIVDPTKVLQSAMT 518
            |||.||..|...||:||||:.:.|..:||.... .:||:||.|::.||:..||:|||||::..:.
plant   494 IVKRALSYPLKLIAKNAGVNGSVVSEKVLANDNVKFGYNAATGKYEDLMAAGIIDPTKVVRCCLE 558

  Fly   519 SAAGIASLLATTEVLITKQPTKPKIP 544
            .||.:|.....::.::.:.|....:|
plant   559 HAASVAKTFLMSDCVVVEIPEPEPVP 584

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Hsp60DNP_609656.1 PTZ00114 13..546 CDD:185455 191/540 (35%)
GroEL 18..536 CDD:239460 188/525 (36%)
Cpn60beta2NP_187956.1 PLN03167 1..596 CDD:215611 193/546 (35%)
groEL 51..596 CDD:237231 191/537 (36%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG0459
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D415781at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR45633
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 1 0.960 - -
54.880

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