DRSC/TRiP Functional Genomics Resources

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Protein Alignment Hsp60D and HSP60-2

DIOPT Version :10

Sequence 1:NP_609656.1 Gene:Hsp60D / 34763 FlyBaseID:FBgn0032525 Length:558 Species:Drosophila melanogaster
Sequence 2:NP_850203.1 Gene:HSP60-2 / 817883 AraportID:AT2G33210 Length:585 Species:Arabidopsis thaliana


Alignment Length:530 Identity:207/530 - (39%)
Similarity:331/530 - (62%) Gaps:10/530 - (1%)


- Green bases have known domain annotations that are detailed below.


  Fly    17 ANDIRFGAEARCLLMQGVNVLANAVATTLGPKGRNVLIEQLLISPRITKDGITVANNVQLGNRRQ 81
            |.|||||.|||.|:::||..||:||..|:|||||||:|||...:|::||||:|||.:::..:|.:
plant    34 AKDIRFGVEARALMLRGVEDLADAVKVTMGPKGRNVIIEQSWGAPKVTKDGVTVAKSIEFKDRIK 98

  Fly    82 DMGVQLLRQATNNTNNKVGDGTTTATILARGIACQGMHVLRQSKVNVQLLREGILEGSRAVCDAL 146
            ::|..|::|..|.||:..|||||.||:|.|.|..:|...: .:.:|...||.||......|...|
plant    99 NVGASLVKQVANATNDVAGDGTTCATVLTRAIFTEGCKSV-AAGMNAMDLRRGIKLAVDTVVTNL 162

  Fly   147 GEMSQSVDTIGQVEAVAKVALNGDERLAELIGDIILELGDSGVILLKESHSPFDEAKIQEGITIA 211
            ...::.:.|..::..|..::.|||..:.|||...:..:|..|||.:::..:.|:|.::.||:.|.
plant   163 QSRARMISTSEEIAQVGTISANGDREIGELIAKAMETVGKEGVITIQDGKTLFNELEVVEGMKID 227

  Fly   212 SGYYSPFFAKQSHT--LELENCLLLLTLAKIDQVEQILPALELARLKERPLLIIAKNFGSDLLKI 274
            .||.||:|.....|  .|||:.|:|:...||..:..::..||||..|:|||||:|::..||.|..
plant   228 RGYISPYFITNPKTQKCELEDPLILIHEKKISNINAMVKVLELALKKQRPLLIVAEDVESDALAT 292

  Fly   275 LVLNNLQGRVQVCAVKAPSFGDEQCEEMEDIAFATGGHLLEDASSLADLSEEDL---GEVMEAVV 336
            |:||.|:..::|||||||.||:.:...:.|:|..||..::.:...: :|...||   |...:..|
plant   293 LILNKLRANIKVCAVKAPGFGENRKANLHDLAALTGAQVITEELGM-NLDNIDLSMFGNCKKVTV 356

  Fly   337 DAKETHLLQPINVNEEQVQCRIQDIRELIDEAFTDVELDRLKTRLGRLQGHLATIFVGGTSELEV 401
            ...:|.:|.... :::.:..|.:.||.:::.:.:|.:.::|:.||.:|.|.:|.:.:||.||.||
plant   357 SKDDTVVLDGAG-DKQAIGERCEQIRSMVEASTSDYDKEKLQERLAKLSGGVAVLKIGGASETEV 420

  Fly   402 SERKDRFNDALHAVRVAISDGVVPGGGTAYLRCIPVLDELPPTDIMELQVGREIVKDALRLPCYT 466
            ||:|||..|||:|.:.|:.:|:|||||.|.|.....|::| .|...:.::|.:|:::||:.|.||
plant   421 SEKKDRVTDALNATKAAVEEGIVPGGGVALLYASKELEKL-STANFDQKIGVQIIQNALKTPVYT 484

  Fly   467 IARNAGVDPNEVLRRVL-KGSGNYGYDAAAGEFGDLVVRGIVDPTKVLQSAMTSAAGIASLLATT 530
            ||.||||:...|:.::| :.:.:.|||||.||:.|::..||:||.||:::|:..||.::|||.||
plant   485 IASNAGVEGAVVVGKLLEQDNPDLGYDAAKGEYVDMIKAGIIDPLKVIRTALVDAASVSSLLTTT 549

  Fly   531 EVLITKQPTK 540
            |.::|:.|||
plant   550 EAVVTEIPTK 559

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Hsp60DNP_609656.1 GroEL 18..536 CDD:239460 202/523 (39%)
HSP60-2NP_850203.1 GroEL 35..555 CDD:239460 202/523 (39%)

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