DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Hsp60D and CCT3

DIOPT Version :9

Sequence 1:NP_609656.1 Gene:Hsp60D / 34763 FlyBaseID:FBgn0032525 Length:558 Species:Drosophila melanogaster
Sequence 2:NP_001189236.1 Gene:CCT3 / 42029 FlyBaseID:FBgn0015019 Length:544 Species:Drosophila melanogaster


Alignment Length:591 Identity:118/591 - (19%)
Similarity:219/591 - (37%) Gaps:162/591 - (27%)


- Green bases have known domain annotations that are detailed below.


  Fly    31 MQGVNVLANAVATTLGPKGRNVLIEQLLISPR----ITKDGITVANNVQLGNRRQDMGVQLLRQA 91
            :|....:|:.:.|.|||:.    :.::|:.|.    :|.||..:...:.:    |....:.:.:.
  Fly    28 IQAGKAIADVIRTCLGPQA----MLKMLMDPMGGIVMTNDGNAILREITV----QHPAAKSMIEI 84

  Fly    92 TNNTNNKVGDGTTTATILARGIACQGMHVLRQSKVNVQLLREGILEGSRAVCDALGEMSQSVDTI 156
            ....:.:||||||:..:||                                    |||..:.:..
  Fly    85 ARTQDEEVGDGTTSVIVLA------------------------------------GEMLAAAEPF 113

  Fly   157 GQVEAVAKVALNG-DERLAELIGDIILELGDSGVILLKESHSPFDEAKIQEGITIASGYYSPFFA 220
            .|.:....|.:.. .|.|.:::|.:..:|.    |.|...    |:||:.:.:....|  :.|..
  Fly   114 LQQQIHPTVIIRAYREALEDIVGHLQSQLS----IQLDVK----DKAKMADVVKACVG--TKFIG 168

  Fly   221 KQS-----------HTLEL-ENCLLLLTLAKIDQVEQILP--ALE------------------LA 253
            |.|           .|:.| ||..|.:.:.:..:||:| |  |:|                  :.
  Fly   169 KWSDLAVKIALDAVETVTLSENGRLEVDIKRYAKVEKI-PGGAIEESCVLKGVMINKDVTHPKMR 232

  Fly   254 RLKERPLLII-------AKNFGSDLLKILVLNNLQGRVQVCAVKAPSFGDEQCEEM----EDIAF 307
            ||.|.|.:::       .|......::|:...:....:|:    ...|....|.::    .|:.|
  Fly   233 RLIENPRIVLLDCSLEYKKGESQTNVEIIGEQDFTRMLQI----EEEFVQRICADIIAVKPDLVF 293

  Fly   308 ATGGHLLEDASSLADLSEEDLGEV-MEAVVDAKETHLLQ--------PINVNEEQVQ------CR 357
            ...|        ::||::..|.:. :.|:...::|..|:        .:|..||..:      ..
  Fly   294 TEKG--------VSDLAQHYLLKAGITAIRRLRKTDNLRIARACGATIVNRTEELTEKDVGTGAG 350

  Fly   358 IQDIRELIDEAFTDV-ELDRLKTRLGRLQGHLATIFVGGTSELEVSERKDRFNDALHAVR-VAIS 420
            :.:::::.||.||.| |....|.         .||.:.|.|:..::|.:....||||..| :.:.
  Fly   351 LFEVKKIGDEYFTFVTECKEPKA---------CTILLRGASKDILNETERNLQDALHVARNLVLE 406

  Fly   421 DGVVPGGGTAYLRCIPVLDELPPTDIMELQVGREIVKDALRLPCYTIARNAGVDPNEVLRRVL-- 483
            ..:|.|||...:....:|..      .:::.....|..||.:...|:|:|.|.:....|..:.  
  Fly   407 PRLVAGGGAVEMAASQLLTR------KQVKGPYTAVAHALEIIPRTLAQNCGANTIRALTALRAK 465

  Fly   484 ----KGSG--NYGYDAAAGEFGDLVVRGIVDPTKVLQSAMTSAAGIASLLATTEVLIT------- 535
                .|.|  .:|.|..:||..|:.|:.|.:|..|......:|...|.||...:.:::       
  Fly   466 HASHTGDGVCAWGIDGESGEIVDMNVKNIWEPLAVKLQTYKTAVETAILLLRIDDIVSGSKKRGG 530

  Fly   536 KQPTKP 541
            .:||.|
  Fly   531 NEPTNP 536

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Hsp60DNP_609656.1 PTZ00114 13..546 CDD:185455 118/591 (20%)
GroEL 18..536 CDD:239460 115/584 (20%)
CCT3NP_001189236.1 chap_CCT_gamma 7..528 CDD:274085 115/581 (20%)
TCP1_gamma 7..524 CDD:239453 115/577 (20%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C45453469
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG0459
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
32.740

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